Analysis of interatomic Contacts of Structural Units in PDB entry:
6ROL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ROL entry

There are 4 chains in PDB entry 6ROL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 425GLU 586
B
 GLU 426GLU 586
C
 GLU 426GLU 586
D
 GLU 426GLN 584
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6ROL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
438 444Right-handed alpha
Helix 2
AA2
A
447 458Right-handed alpha
Helix 3
AA3
A
481 499Right-handed alpha
Helix 4
AA4
A
520 526Right-handed alpha
Helix 5
AA5
A
529 540Right-handed alpha
Helix 6
AA6
A
564 585Right-handed alpha
Helix 7
AA7
B
438 444Right-handed alpha
Helix 8
AA8
B
447 458Right-handed alpha
Helix 9
AA9
B
481 499Right-handed alpha
Helix 10
AB1
B
518 526Right-handed alpha
Helix 11
AB2
B
529 540Right-handed alpha
Helix 12
AB3
B
565 583Right-handed alpha
Helix 13
AB4
B
584 586Right-handed 310
Helix 14
AB5
C
438 444Right-handed alpha
Helix 15
AB6
C
447 458Right-handed alpha
Helix 16
AB7
C
481 499Right-handed alpha
Helix 17
AB8
C
518 526Right-handed alpha
Helix 18
AB9
C
529 540Right-handed alpha
Helix 19
AC1
C
564 586Right-handed alpha
Helix 20
AC2
D
438 444Right-handed alpha
Helix 21
AC3
D
447 458Right-handed alpha
Helix 22
AC4
D
481 499Right-handed alpha
Helix 23
AC5
D
518 526Right-handed alpha
Helix 24
AC6
D
529 540Right-handed alpha
Helix 25
AC7
D
564 583Right-handed alpha
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There are 4 sheets in PDB entry 6ROL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
460 463first strand
Strand 2
A
473 480anti-parallel
Strand 3
A
428 435anti-parallel
Strand 4
A
510 517anti-parallel
Strand 5
A
556 563anti-parallel
Strand 6
A
542 544anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
460 463first strand
Strand 2
B
473 480anti-parallel
Strand 3
B
428 435anti-parallel
Strand 4
B
509 517anti-parallel
Strand 5
B
556 564anti-parallel
Strand 6
B
542 544anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
460 463first strand
Strand 2
C
473 480anti-parallel
Strand 3
C
428 435anti-parallel
Strand 4
C
510 517anti-parallel
Strand 5
C
556 563anti-parallel
Strand 6
C
542 544anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
460 463first strand
Strand 2
D
473 480anti-parallel
Strand 3
D
428 435anti-parallel
Strand 4
D
510 517anti-parallel
Strand 5
D
556 563anti-parallel
Strand 6
D
542 544anti-parallel
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