Analysis of interatomic Contacts of Structural Units in PDB entry:
6ROW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ROW entry

There are 7 chains in PDB entry 6ROW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 81	TRP 835
B	ASN 81	TRP 835
C	ASN 81	TRP 835
D	ASN 81	VAL 834
E	THR 70	PRO 427
F	THR 70	PRO 427
G	ASP 9	ASP 253

There are136 helices in PDB entry 6ROW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	85	97	Right-handed alpha
Helix 2	AA2	A	109	121	Right-handed alpha
Helix 3	AA3	A	132	150	Right-handed alpha
Helix 4	AA4	A	161	172	Right-handed alpha
Helix 5	AA5	A	185	197	Right-handed alpha
Helix 6	AA6	A	213	225	Right-handed alpha
Helix 7	AA7	A	267	285	Right-handed alpha
Helix 8	AA8	A	297	316	Right-handed alpha
Helix 9	AA9	A	357	361	Right-handed 310
Helix 10	AB1	A	382	389	Right-handed alpha
Helix 11	AB2	A	390	393	Right-handed 310
Helix 12	AB3	A	401	416	Right-handed alpha
Helix 13	AB4	A	462	474	Right-handed alpha
Helix 14	AB5	A	474	487	Right-handed alpha
Helix 15	AB6	A	489	494	Right-handed alpha
Helix 16	AB7	A	494	510	Right-handed alpha
Helix 17	AB8	A	521	533	Right-handed alpha
Helix 18	AB9	A	561	567	Right-handed alpha
Helix 19	AC1	A	581	594	Right-handed alpha
Helix 20	AC2	A	595	600	Right-handed 310
Helix 21	AC3	A	630	634	Right-handed 310
Helix 22	AC4	A	642	649	Right-handed alpha
Helix 23	AC5	A	649	661	Right-handed alpha
Helix 24	AC6	A	665	669	Right-handed 310
Helix 25	AC7	A	690	707	Right-handed alpha
Helix 26	AC8	A	722	749	Right-handed alpha
Helix 27	AC9	A	764	777	Right-handed alpha
Helix 28	AD1	A	782	793	Right-handed alpha
Helix 29	AD2	A	797	806	Right-handed alpha
Helix 30	AD3	A	809	816	Right-handed alpha
Helix 31	AD4	B	85	97	Right-handed alpha
Helix 32	AD5	B	108	121	Right-handed alpha
Helix 33	AD6	B	133	150	Right-handed alpha
Helix 34	AD7	B	162	175	Right-handed alpha
Helix 35	AD8	B	187	195	Right-handed alpha
Helix 36	AD9	B	212	225	Right-handed alpha
Helix 37	AE1	B	269	277	Right-handed alpha
Helix 38	AE2	B	278	282	Right-handed 310
Helix 39	AE3	B	295	314	Right-handed alpha
Helix 40	AE4	B	318	322	Right-handed 310
Helix 41	AE5	B	324	329	Right-handed alpha
Helix 42	AE6	B	334	341	Right-handed alpha
Helix 43	AE7	B	353	358	Right-handed alpha
Helix 44	AE8	B	399	416	Right-handed alpha
Helix 45	AE9	B	424	429	Right-handed 310
Helix 46	AF1	B	462	472	Right-handed alpha
Helix 47	AF2	B	474	487	Right-handed alpha
Helix 48	AF3	B	488	510	Right-handed alpha
Helix 49	AF4	B	519	532	Right-handed alpha
Helix 50	AF5	B	561	567	Right-handed alpha
Helix 51	AF6	B	580	597	Right-handed alpha
Helix 52	AF7	B	628	632	Right-handed 310
Helix 53	AF8	B	644	649	Right-handed alpha
Helix 54	AF9	B	649	659	Right-handed alpha
Helix 55	AG1	B	660	663	Right-handed 310
Helix 56	AG2	B	690	707	Right-handed alpha
Helix 57	AG3	B	721	751	Right-handed alpha
Helix 58	AG4	B	766	777	Right-handed alpha
Helix 59	AG5	B	782	788	Right-handed alpha
Helix 60	AG6	B	797	808	Right-handed alpha
Helix 61	AG7	B	810	816	Right-handed alpha
Helix 62	AG8	C	85	99	Right-handed alpha
Helix 63	AG9	C	108	113	Right-handed alpha
Helix 64	AH1	C	115	121	Right-handed alpha
Helix 65	AH2	C	134	150	Right-handed alpha
Helix 66	AH3	C	161	175	Right-handed alpha
Helix 67	AH4	C	176	179	Right-handed 310
Helix 68	AH5	C	180	186	Right-handed alpha
Helix 69	AH6	C	186	197	Right-handed alpha
Helix 70	AH7	C	219	225	Right-handed alpha
Helix 71	AH8	C	268	285	Right-handed alpha
Helix 72	AH9	C	297	316	Right-handed alpha
Helix 73	AI1	C	336	340	Right-handed 310
Helix 74	AI2	C	354	360	Right-handed alpha
Helix 75	AI3	C	408	415	Right-handed alpha
Helix 76	AI4	C	463	474	Right-handed alpha
Helix 77	AI5	C	474	486	Right-handed alpha
Helix 78	AI6	C	488	514	Right-handed alpha
Helix 79	AI7	C	519	533	Right-handed alpha
Helix 80	AI8	C	561	567	Right-handed alpha
Helix 81	AI9	C	580	597	Right-handed alpha
Helix 82	AJ1	C	642	660	Right-handed alpha
Helix 83	AJ2	C	665	669	Right-handed 310
Helix 84	AJ3	C	689	690	Right-handed 310
Helix 85	AJ4	C	691	706	Right-handed alpha
Helix 86	AJ5	C	728	746	Right-handed alpha
Helix 87	AJ6	C	764	776	Right-handed alpha
Helix 88	AJ7	C	783	789	Right-handed alpha
Helix 89	AJ8	C	799	807	Right-handed alpha
Helix 90	AJ9	C	808	809	Right-handed 310
Helix 91	AK1	C	810	816	Right-handed 310
Helix 92	AK2	D	85	99	Right-handed alpha
Helix 93	AK3	D	108	121	Right-handed alpha
Helix 94	AK4	D	132	152	Right-handed alpha
Helix 95	AK5	D	161	174	Right-handed alpha
Helix 96	AK6	D	215	225	Right-handed alpha
Helix 97	AK7	D	270	284	Right-handed alpha
Helix 98	AK8	D	297	314	Right-handed alpha
Helix 99	AK9	D	318	322	Right-handed 310
Helix 100	AL1	D	324	329	Right-handed alpha
Helix 101	AL2	D	353	359	Right-handed alpha
Helix 102	AL3	D	382	393	Right-handed alpha
Helix 103	AL4	D	404	416	Right-handed alpha
Helix 104	AL5	D	462	474	Right-handed alpha
Helix 105	AL6	D	476	484	Right-handed alpha
Helix 106	AL7	D	490	510	Right-handed alpha
Helix 107	AL8	D	523	533	Right-handed alpha
Helix 108	AL9	D	560	567	Right-handed alpha
Helix 109	AM1	D	581	596	Right-handed alpha
Helix 110	AM2	D	597	600	Right-handed 310
Helix 111	AM3	D	633	637	Right-handed 310
Helix 112	AM4	D	642	649	Right-handed alpha
Helix 113	AM5	D	649	659	Right-handed alpha
Helix 114	AM6	D	660	663	Right-handed 310
Helix 115	AM7	D	665	669	Right-handed 310
Helix 116	AM8	D	691	707	Right-handed alpha
Helix 117	AM9	D	725	751	Right-handed alpha
Helix 118	AN1	D	764	776	Right-handed alpha
Helix 119	AN2	D	782	791	Right-handed alpha
Helix 120	AN3	D	797	809	Right-handed alpha
Helix 121	AN4	D	809	817	Right-handed alpha
Helix 122	AN5	E	237	245	Right-handed alpha
Helix 123	AN6	E	328	339	Right-handed alpha
Helix 124	AN7	E	373	377	Right-handed 310
Helix 125	AN8	E	404	410	Right-handed alpha
Helix 126	AN9	F	227	231	Right-handed 310
Helix 127	AO1	F	237	245	Right-handed alpha
Helix 128	AO2	F	328	339	Right-handed alpha
Helix 129	AO3	F	372	377	Right-handed alpha
Helix 130	AO4	F	404	410	Right-handed alpha
Helix 131	AO5	G	10	14	Right-handed alpha
Helix 132	AO6	G	31	46	Right-handed alpha
Helix 133	AO7	G	59	65	Right-handed alpha
Helix 134	AO8	G	77	85	Right-handed alpha
Helix 135	AO9	G	160	170	Right-handed alpha
Helix 136	AP1	G	181	186	Right-handed alpha

There are 19 sheets in PDB entry 6ROW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	236	first strand
Strand 2	A	244	245	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	534	538	first strand
Strand 2	A	624	628	parallel
Strand 3	A	618	619	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	231	236	first strand
Strand 2	B	244	249	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	331	332	first strand
Strand 2	B	378	379	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	231	236	first strand
Strand 2	C	244	249	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	536	first strand
Strand 2	C	624	626	parallel
Strand 3	C	617	619	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	231	234	first strand
Strand 2	D	246	249	anti-parallel
Strand 3	D	378	380	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	74	76	first strand
Strand 2	E	85	91	anti-parallel
Strand 3	E	222	225	parallel
Strand 4	E	93	99	anti-parallel
Strand 5	E	202	207	parallel
Strand 6	E	179	184	anti-parallel
Strand 7	E	167	168	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	251	253	first strand
Strand 2	E	413	416	anti-parallel
Strand 3	E	421	424	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	297	298	first strand
Strand 2	E	316	317	anti-parallel
Strand 3	E	401	402	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	342	343	first strand
Strand 2	E	350	351	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	360	364	first strand
Strand 2	E	367	371	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	74	75	first strand
Strand 2	F	86	91	anti-parallel
Strand 3	F	222	225	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	98	99	first strand
Strand 2	F	206	207	parallel
Strand 3	F	179	180	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	251	253	first strand
Strand 2	F	413	416	anti-parallel
Strand 3	F	421	424	anti-parallel
Strand 4	F	288	289	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	297	299	first strand
Strand 2	F	315	317	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	325	326	first strand
Strand 2	F	388	389	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	360	364	first strand
Strand 2	F	367	371	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	174	175	first strand
Strand 2	G	204	210	anti-parallel
Strand 3	G	217	221	anti-parallel
Strand 4	G	236	237	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ROW

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ROW