Analysis of interatomic Contacts of Structural Units in PDB entry:
6RR0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6RR0 entry

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 21 chains in PDB entry 6RR0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 969	ILE 1084
B	ASN 968	GLN 1085
C	ASN 968	ILE 1084
D	SER 970	ILE 1084
E	SER 970	GLN 1085
F	LEU 969	ILE 1084
G	SER 970	ILE 1084
H	LEU 117	SER 122
H	GLU 124	PRO 126
I	LEU 117	SER 122
I	GLU 124	SER 127
J	SER 118	SER 122
J	GLU 124	PRO 126
K	SER 118	SER 122
K	GLU 124	PRO 126
L	LEU 117	SER 122
L	GLU 124	SER 128
M	LEU 117	SER 122
M	GLU 124	PRO 126
N	THR 119	SER 122
N	GLU 124	SER 127

There are 41 helices in PDB entry 6RR0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	970	983	Right-handed alpha
Helix 2	AA2	A	998	1019	Right-handed alpha
Helix 3	AA3	A	1039	1043	Right-handed 310
Helix 4	AA4	A	1047	1059	Right-handed alpha
Helix 5	AA5	A	1070	1079	Right-handed alpha
Helix 6	AA6	B	970	983	Right-handed alpha
Helix 7	AA7	B	998	1019	Right-handed alpha
Helix 8	AA8	B	1027	1031	Right-handed 310
Helix 9	AA9	B	1039	1043	Right-handed 310
Helix 10	AB1	B	1047	1059	Right-handed alpha
Helix 11	AB2	B	1070	1080	Right-handed alpha
Helix 12	AB3	C	970	983	Right-handed alpha
Helix 13	AB4	C	998	1019	Right-handed alpha
Helix 14	AB5	C	1027	1031	Right-handed 310
Helix 15	AB6	C	1039	1043	Right-handed 310
Helix 16	AB7	C	1047	1058	Right-handed alpha
Helix 17	AB8	C	1069	1080	Right-handed alpha
Helix 18	AB9	D	971	983	Right-handed alpha
Helix 19	AC1	D	998	1019	Right-handed alpha
Helix 20	AC2	D	1027	1031	Right-handed 310
Helix 21	AC3	D	1039	1043	Right-handed 310
Helix 22	AC4	D	1047	1059	Right-handed alpha
Helix 23	AC5	D	1070	1080	Right-handed alpha
Helix 24	AC6	E	971	983	Right-handed alpha
Helix 25	AC7	E	998	1019	Right-handed alpha
Helix 26	AC8	E	1027	1031	Right-handed 310
Helix 27	AC9	E	1039	1043	Right-handed 310
Helix 28	AD1	E	1047	1056	Right-handed alpha
Helix 29	AD2	E	1069	1080	Right-handed alpha
Helix 30	AD3	F	971	983	Right-handed alpha
Helix 31	AD4	F	998	1019	Right-handed alpha
Helix 32	AD5	F	1027	1031	Right-handed 310
Helix 33	AD6	F	1039	1043	Right-handed 310
Helix 34	AD7	F	1047	1057	Right-handed alpha
Helix 35	AD8	F	1069	1081	Right-handed alpha
Helix 36	AD9	G	971	983	Right-handed alpha
Helix 37	AE1	G	998	1019	Right-handed alpha
Helix 38	AE2	G	1027	1031	Right-handed 310
Helix 39	AE3	G	1039	1043	Right-handed 310
Helix 40	AE4	G	1047	1057	Right-handed alpha
Helix 41	AE5	G	1069	1080	Right-handed alpha

There are 7 sheets in PDB entry 6RR0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1023	1024	first strand
Strand 2	A	986	989	parallel
Strand 3	A	1033	1036	parallel
Strand 4	A	1066	1069	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1023	1024	first strand
Strand 2	B	986	989	parallel
Strand 3	B	1033	1036	parallel
Strand 4	B	1066	1069	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1023	1024	first strand
Strand 2	C	986	989	parallel
Strand 3	C	1033	1035	parallel
Strand 4	C	1066	1068	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1023	1024	first strand
Strand 2	D	986	989	parallel
Strand 3	D	1033	1036	parallel
Strand 4	D	1066	1069	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1023	1024	first strand
Strand 2	E	986	989	parallel
Strand 3	E	1033	1035	parallel
Strand 4	E	1066	1068	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1023	1024	first strand
Strand 2	F	986	989	parallel
Strand 3	F	1033	1035	parallel
Strand 4	F	1066	1068	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1023	1024	first strand
Strand 2	G	986	989	parallel
Strand 3	G	1033	1035	parallel
Strand 4	G	1066	1068	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6RR0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6RR0