Analysis of interatomic Contacts of Structural Units in PDB entry:
6RRV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RRV entry

There is 1 chain in PDB entry 6RRV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 959GLN 1085
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 6RRV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
968 983Right-handed alpha
Helix 2
AA2
A
998 1019Right-handed alpha
Helix 3
AA3
A
1027 1031Right-handed 310
Helix 4
AA4
A
1039 1043Right-handed 310
Helix 5
AA5
A
1047 1058Right-handed alpha
Helix 6
AA6
A
1070 1080Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 6RRV.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1023 1025first strand
Strand 2
A
986 989parallel
Strand 3
A
1033 1036parallel
Strand 4
A
1066 1069parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il