Analysis of interatomic Contacts of Structural Units in PDB entry:
6RSX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RSX entry

There is 1 chain in PDB entry 6RSX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 131ARG 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 6RSX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
136 148Right-handed alpha
Helix 2
AA2
A
150 155Right-handed alpha
Helix 3
AA3
A
157 168Right-handed alpha
Helix 4
AA4
A
222 229Right-handed alpha
Helix 5
AA5
A
249 256Right-handed alpha
Helix 6
AA6
A
256 274Right-handed alpha
Helix 7
AA7
A
275 278Right-handed 310
Helix 8
AA8
A
281 292Right-handed alpha
Helix 9
AA9
A
344 351Right-handed alpha
Helix 10
AB1
A
371 378Right-handed alpha
Helix 11
AB2
A
381 389Right-handed alpha
Helix 12
AB3
A
390 393Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 6RSX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 173first strand
Strand 2
A
242 248anti-parallel
Strand 3
A
188 194anti-parallel
Strand 4
A
220 221anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 180first strand
Strand 2
A
235 238anti-parallel
Strand 3
A
197 201anti-parallel
Strand 4
A
210 215anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 297first strand
Strand 2
A
364 370anti-parallel
Strand 3
A
312 318anti-parallel
Strand 4
A
342 343anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 304first strand
Strand 2
A
357 360anti-parallel
Strand 3
A
321 327anti-parallel
Strand 4
A
330 337anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il