Analysis of interatomic Contacts of Structural Units in PDB entry:
6RTB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RTB entry

There are 10 chains in PDB entry 6RTB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 SER 9GLY 93
C
 SER 9GLY 93
I
 SER 9GLY 93
D
 SER 9GLY 93
J
 SER 9GLY 93
E
 SER 9GLY 93
G
 SER 9GLY 93
B
 SER 9GLY 93
F
 SER 9GLY 93
A
 SER 9GLY 93
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 6RTB

There are 15 sheets in PDB entry 6RTB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
15 17first strand
Strand 2
I
15 17parallel
Strand 3
H
15 17parallel
Strand 4
G
15 17parallel
Strand 5
F
15 17parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
37 43first strand
Strand 2
I
36 43parallel
Strand 3
H
36 43parallel
Strand 4
G
37 43parallel
Strand 5
F
37 43parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
48 50first strand
Strand 2
I
48 50parallel
Strand 3
H
48 50parallel
Strand 4
G
48 50parallel
Strand 5
F
48 50parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
65 66first strand
Strand 2
I
65 66parallel
Strand 3
H
65 66parallel
Strand 4
G
65 66parallel
Strand 5
F
65 66parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
70 72first strand
Strand 2
I
70 72parallel
Strand 3
H
70 72parallel
Strand 4
G
70 72parallel
Strand 5
F
70 72parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
75 79first strand
Strand 2
I
75 79parallel
Strand 3
H
75 79parallel
Strand 4
G
75 79parallel
Strand 5
F
75 79parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
82 83first strand
Strand 2
I
82 83parallel
Strand 3
H
82 83parallel
Strand 4
G
82 83parallel
Strand 5
F
82 83parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
89 91first strand
Strand 2
I
89 91parallel
Strand 3
J
89 91parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
15 17first strand
Strand 2
C
15 17parallel
Strand 3
B
15 17parallel
Strand 4
A
15 17parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
37 43first strand
Strand 2
D
37 43parallel
Strand 3
C
37 41parallel
Strand 4
B
37 41parallel
Strand 5
A
37 41parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
47 52first strand
Strand 2
D
47 52parallel
Strand 3
C
47 52parallel
Strand 4
B
47 52parallel
Strand 5
A
47 52parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
70 72first strand
Strand 2
D
70 72parallel
Strand 3
C
70 72parallel
Strand 4
B
70 72parallel
Strand 5
A
70 72parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
75 79first strand
Strand 2
D
75 79parallel
Strand 3
C
75 79parallel
Strand 4
B
75 79parallel
Strand 5
A
75 79parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
88 89first strand
Strand 2
D
88 89parallel
Strand 3
C
86 89parallel
Strand 4
B
86 89parallel
Strand 5
A
86 89parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
89 90first strand
Strand 2
F
89 90parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il