Analysis of interatomic Contacts of Structural Units in PDB entry:
6RTC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RTC entry

There are 2 chains in PDB entry 6RTC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 5ASN 740
B
 ARG 5ASN 740
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 6RTC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 24Right-handed alpha
Helix 2
AA2
A
48 56Right-handed alpha
Helix 3
AA3
A
57 61Right-handed 310
Helix 4
AA4
A
70 95Right-handed alpha
Helix 5
AA5
A
101 118Right-handed alpha
Helix 6
AA6
A
128 143Right-handed alpha
Helix 7
AA7
A
162 191Right-handed alpha
Helix 8
AA8
A
200 225Right-handed alpha
Helix 9
AA9
A
235 247Right-handed alpha
Helix 10
AB1
A
255 276Right-handed alpha
Helix 11
AB2
A
286 301Right-handed alpha
Helix 12
AB3
A
329 332Right-handed 310
Helix 13
AB4
A
333 360Right-handed alpha
Helix 14
AB5
A
366 380Right-handed alpha
Helix 15
AB6
A
381 383Right-handed 310
Helix 16
AB7
A
391 401Right-handed alpha
Helix 17
AB8
A
405 421Right-handed alpha
Helix 18
AB9
A
430 442Right-handed alpha
Helix 19
AC1
A
446 449Right-handed 310
Helix 20
AC2
A
450 457Right-handed alpha
Helix 21
AC3
A
459 474Right-handed alpha
Helix 22
AC4
A
477 498Right-handed alpha
Helix 23
AC5
A
516 520Right-handed 310
Helix 24
AC6
A
539 541Right-handed 310
Helix 25
AC7
A
542 552Right-handed alpha
Helix 26
AC8
A
670 672Right-handed 310
Helix 27
AC9
A
676 692Right-handed alpha
Helix 28
AD1
A
703 712Right-handed alpha
Helix 29
AD2
A
729 740Right-handed alpha
Helix 30
AD3
B
16 24Right-handed alpha
Helix 31
AD4
B
48 56Right-handed alpha
Helix 32
AD5
B
57 61Right-handed 310
Helix 33
AD6
B
70 95Right-handed alpha
Helix 34
AD7
B
101 118Right-handed alpha
Helix 35
AD8
B
128 143Right-handed alpha
Helix 36
AD9
B
162 191Right-handed alpha
Helix 37
AE1
B
200 225Right-handed alpha
Helix 38
AE2
B
235 247Right-handed alpha
Helix 39
AE3
B
255 276Right-handed alpha
Helix 40
AE4
B
286 301Right-handed alpha
Helix 41
AE5
B
329 332Right-handed 310
Helix 42
AE6
B
333 360Right-handed alpha
Helix 43
AE7
B
366 380Right-handed alpha
Helix 44
AE8
B
381 383Right-handed 310
Helix 45
AE9
B
391 401Right-handed alpha
Helix 46
AF1
B
405 421Right-handed alpha
Helix 47
AF2
B
430 442Right-handed alpha
Helix 48
AF3
B
446 449Right-handed 310
Helix 49
AF4
B
450 457Right-handed alpha
Helix 50
AF5
B
459 474Right-handed alpha
Helix 51
AF6
B
477 498Right-handed alpha
Helix 52
AF7
B
516 520Right-handed 310
Helix 53
AF8
B
539 541Right-handed 310
Helix 54
AF9
B
542 552Right-handed alpha
Helix 55
AG1
B
670 672Right-handed 310
Helix 56
AG2
B
676 692Right-handed alpha
Helix 57
AG3
B
703 712Right-handed alpha
Helix 58
AG4
B
729 740Right-handed alpha
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There are 7 sheets in PDB entry 6RTC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 13first strand
Strand 2
B
7 13anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 150first strand
Strand 2
A
159 160anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 507first strand
Strand 2
A
514 515anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
530 533first strand
Strand 2
A
664 668parallel
Strand 3
A
696 700parallel
Strand 4
A
726 727parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 150first strand
Strand 2
B
159 160anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
506 507first strand
Strand 2
B
514 515anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
530 533first strand
Strand 2
B
664 668parallel
Strand 3
B
696 700parallel
Strand 4
B
726 727parallel
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