Analysis of interatomic Contacts of Structural Units in PDB entry:
6RU4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RU4 entry

There are 4 chains in PDB entry 6RU4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 41GLY 316
B
 LYS 41GLY 316
C
 LYS 41GLY 316
D
 ARG 42GLY 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 6RU4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 61Right-handed alpha
Helix 2
AA2
A
82 87Right-handed alpha
Helix 3
AA3
A
88 92Right-handed 310
Helix 4
AA4
A
103 112Right-handed alpha
Helix 5
AA5
A
147 151Right-handed 310
Helix 6
AA6
A
152 170Right-handed alpha
Helix 7
AA7
A
173 197Right-handed alpha
Helix 8
AA8
A
216 221Right-handed alpha
Helix 9
AA9
A
222 224Right-handed 310
Helix 10
AB1
A
240 254Right-handed alpha
Helix 11
AB2
A
269 278Right-handed alpha
Helix 12
AB3
A
295 314Right-handed alpha
Helix 13
AB4
B
49 61Right-handed alpha
Helix 14
AB5
B
82 89Right-handed alpha
Helix 15
AB6
B
90 92Right-handed 310
Helix 16
AB7
B
103 112Right-handed alpha
Helix 17
AB8
B
147 150Right-handed 310
Helix 18
AB9
B
151 170Right-handed alpha
Helix 19
AC1
B
173 197Right-handed alpha
Helix 20
AC2
B
216 222Right-handed alpha
Helix 21
AC3
B
240 254Right-handed alpha
Helix 22
AC4
B
268 278Right-handed alpha
Helix 23
AC5
B
295 314Right-handed alpha
Helix 24
AC6
C
49 61Right-handed alpha
Helix 25
AC7
C
82 88Right-handed alpha
Helix 26
AC8
C
89 92Right-handed 310
Helix 27
AC9
C
103 112Right-handed alpha
Helix 28
AD1
C
147 150Right-handed 310
Helix 29
AD2
C
151 170Right-handed alpha
Helix 30
AD3
C
173 197Right-handed alpha
Helix 31
AD4
C
216 222Right-handed alpha
Helix 32
AD5
C
240 254Right-handed alpha
Helix 33
AD6
C
269 278Right-handed alpha
Helix 34
AD7
C
295 314Right-handed alpha
Helix 35
AD8
D
49 61Right-handed alpha
Helix 36
AD9
D
82 89Right-handed alpha
Helix 37
AE1
D
90 92Right-handed 310
Helix 38
AE2
D
103 112Right-handed alpha
Helix 39
AE3
D
147 150Right-handed 310
Helix 40
AE4
D
151 170Right-handed alpha
Helix 41
AE5
D
173 197Right-handed alpha
Helix 42
AE6
D
216 222Right-handed alpha
Helix 43
AE7
D
240 254Right-handed alpha
Helix 44
AE8
D
269 278Right-handed alpha
Helix 45
AE9
D
295 314Right-handed alpha
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There are 8 sheets in PDB entry 6RU4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 68first strand
Strand 2
A
43 47parallel
Strand 3
A
94 97parallel
Strand 4
A
120 122parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 230first strand
Strand 2
A
209 211parallel
Strand 3
A
258 262parallel
Strand 4
A
280 284parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 68first strand
Strand 2
B
44 47parallel
Strand 3
B
94 97parallel
Strand 4
B
120 122parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 230first strand
Strand 2
B
209 211parallel
Strand 3
B
258 262parallel
Strand 4
B
280 284parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 68first strand
Strand 2
C
43 47parallel
Strand 3
C
94 97parallel
Strand 4
C
120 122parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
227 230first strand
Strand 2
C
209 211parallel
Strand 3
C
258 262parallel
Strand 4
C
280 284parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
64 68first strand
Strand 2
D
43 47parallel
Strand 3
D
94 97parallel
Strand 4
D
120 122parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
227 230first strand
Strand 2
D
209 211parallel
Strand 3
D
258 262parallel
Strand 4
D
280 284parallel
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