Analysis of interatomic Contacts of Structural Units in PDB entry:
6RUQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6RUQ entry

There are 4 chains in PDB entry 6RUQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 10	LYS 817
B	ASN 10	TYR 816
C	ASN 10	ALA 822
D	ASN 10	SER 818

There are104 helices in PDB entry 6RUQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	36	Right-handed alpha
Helix 2	AA2	A	54	69	Right-handed alpha
Helix 3	AA3	A	81	93	Right-handed alpha
Helix 4	AA4	A	117	129	Right-handed alpha
Helix 5	AA5	A	143	156	Right-handed alpha
Helix 6	AA6	A	172	185	Right-handed alpha
Helix 7	AA7	A	197	212	Right-handed alpha
Helix 8	AA8	A	252	265	Right-handed alpha
Helix 9	AA9	A	279	302	Right-handed alpha
Helix 10	AB1	A	324	335	Right-handed alpha
Helix 11	AB2	A	423	437	Right-handed alpha
Helix 12	AB3	A	446	449	Right-handed 310
Helix 13	AB4	A	462	469	Right-handed alpha
Helix 14	AB5	A	482	487	Right-handed alpha
Helix 15	AB6	A	524	544	Right-handed alpha
Helix 16	AB7	A	574	579	Right-handed alpha
Helix 17	AB8	A	597	630	Right-handed alpha
Helix 18	AB9	A	635	641	Right-handed alpha
Helix 19	AC1	A	653	661	Right-handed alpha
Helix 20	AC2	A	664	676	Right-handed alpha
Helix 21	AC3	A	685	696	Right-handed alpha
Helix 22	AC4	A	706	714	Right-handed alpha
Helix 23	AC5	A	742	756	Right-handed alpha
Helix 24	AC6	A	757	768	Right-handed alpha
Helix 25	AC7	A	788	816	Right-handed alpha
Helix 26	AC8	B	23	36	Right-handed alpha
Helix 27	AC9	B	54	69	Right-handed alpha
Helix 28	AD1	B	80	93	Right-handed alpha
Helix 29	AD2	B	117	129	Right-handed alpha
Helix 30	AD3	B	143	156	Right-handed alpha
Helix 31	AD4	B	172	185	Right-handed alpha
Helix 32	AD5	B	197	212	Right-handed alpha
Helix 33	AD6	B	252	265	Right-handed alpha
Helix 34	AD7	B	279	302	Right-handed alpha
Helix 35	AD8	B	324	336	Right-handed alpha
Helix 36	AD9	B	423	437	Right-handed alpha
Helix 37	AE1	B	446	449	Right-handed 310
Helix 38	AE2	B	462	469	Right-handed alpha
Helix 39	AE3	B	482	487	Right-handed alpha
Helix 40	AE4	B	513	519	Right-handed alpha
Helix 41	AE5	B	524	543	Right-handed alpha
Helix 42	AE6	B	574	579	Right-handed alpha
Helix 43	AE7	B	580	587	Right-handed alpha
Helix 44	AE8	B	595	626	Right-handed alpha
Helix 45	AE9	B	635	641	Right-handed alpha
Helix 46	AF1	B	653	661	Right-handed alpha
Helix 47	AF2	B	664	676	Right-handed alpha
Helix 48	AF3	B	685	696	Right-handed alpha
Helix 49	AF4	B	706	714	Right-handed alpha
Helix 50	AF5	B	742	756	Right-handed alpha
Helix 51	AF6	B	757	768	Right-handed alpha
Helix 52	AF7	B	788	791	Right-handed 310
Helix 53	AF8	B	792	816	Right-handed alpha
Helix 54	AF9	C	23	36	Right-handed alpha
Helix 55	AG1	C	54	69	Right-handed alpha
Helix 56	AG2	C	80	93	Right-handed alpha
Helix 57	AG3	C	117	129	Right-handed alpha
Helix 58	AG4	C	143	156	Right-handed alpha
Helix 59	AG5	C	172	185	Right-handed alpha
Helix 60	AG6	C	197	212	Right-handed alpha
Helix 61	AG7	C	252	265	Right-handed alpha
Helix 62	AG8	C	279	302	Right-handed alpha
Helix 63	AG9	C	324	336	Right-handed alpha
Helix 64	AH1	C	423	437	Right-handed alpha
Helix 65	AH2	C	446	449	Right-handed 310
Helix 66	AH3	C	462	469	Right-handed alpha
Helix 67	AH4	C	482	487	Right-handed alpha
Helix 68	AH5	C	524	543	Right-handed alpha
Helix 69	AH6	C	574	586	Right-handed alpha
Helix 70	AH7	C	596	626	Right-handed alpha
Helix 71	AH8	C	635	641	Right-handed alpha
Helix 72	AH9	C	653	661	Right-handed alpha
Helix 73	AI1	C	664	676	Right-handed alpha
Helix 74	AI2	C	685	696	Right-handed alpha
Helix 75	AI3	C	706	714	Right-handed alpha
Helix 76	AI4	C	742	756	Right-handed alpha
Helix 77	AI5	C	757	768	Right-handed alpha
Helix 78	AI6	C	788	816	Right-handed alpha
Helix 79	AI7	D	23	36	Right-handed alpha
Helix 80	AI8	D	54	69	Right-handed alpha
Helix 81	AI9	D	80	93	Right-handed alpha
Helix 82	AJ1	D	117	129	Right-handed alpha
Helix 83	AJ2	D	143	156	Right-handed alpha
Helix 84	AJ3	D	172	185	Right-handed alpha
Helix 85	AJ4	D	197	212	Right-handed alpha
Helix 86	AJ5	D	252	265	Right-handed alpha
Helix 87	AJ6	D	279	302	Right-handed alpha
Helix 88	AJ7	D	324	336	Right-handed alpha
Helix 89	AJ8	D	423	437	Right-handed alpha
Helix 90	AJ9	D	446	449	Right-handed 310
Helix 91	AK1	D	462	469	Right-handed alpha
Helix 92	AK2	D	482	487	Right-handed alpha
Helix 93	AK3	D	522	543	Right-handed alpha
Helix 94	AK4	D	574	579	Right-handed alpha
Helix 95	AK5	D	579	586	Right-handed alpha
Helix 96	AK6	D	595	626	Right-handed alpha
Helix 97	AK7	D	635	641	Right-handed alpha
Helix 98	AK8	D	653	661	Right-handed alpha
Helix 99	AK9	D	664	676	Right-handed alpha
Helix 100	AL1	D	685	696	Right-handed alpha
Helix 101	AL2	D	706	714	Right-handed alpha
Helix 102	AL3	D	742	756	Right-handed alpha
Helix 103	AL4	D	757	768	Right-handed alpha
Helix 104	AL5	D	792	816	Right-handed alpha

There are 36 sheets in PDB entry 6RUQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	50	first strand
Strand 2	A	11	19	parallel
Strand 3	A	72	74	parallel
Strand 4	A	95	98	parallel
Strand 5	A	110	112	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	164	first strand
Strand 2	A	132	137	parallel
Strand 3	A	191	195	parallel
Strand 4	A	219	222	parallel
Strand 5	A	241	246	parallel
Strand 6	A	358	363	anti-parallel
Strand 7	A	368	374	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	337	340	first strand
Strand 2	A	343	347	anti-parallel
Strand 3	A	353	354	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	394	399	first strand
Strand 2	A	439	444	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	407	408	first strand
Strand 2	A	421	422	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	453	first strand
Strand 2	A	460	461	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	475	480	first strand
Strand 2	A	730	737	anti-parallel
Strand 3	A	489	491	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	475	480	first strand
Strand 2	A	730	737	anti-parallel
Strand 3	A	496	498	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	646	648	first strand
Strand 2	A	700	705	parallel
Strand 3	A	500	505	anti-parallel
Strand 4	A	720	723	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	50	first strand
Strand 2	B	11	19	parallel
Strand 3	B	72	74	parallel
Strand 4	B	95	98	parallel
Strand 5	B	110	112	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	164	first strand
Strand 2	B	132	137	parallel
Strand 3	B	191	195	parallel
Strand 4	B	219	222	parallel
Strand 5	B	241	246	parallel
Strand 6	B	357	363	anti-parallel
Strand 7	B	368	375	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	337	340	first strand
Strand 2	B	343	346	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	394	399	first strand
Strand 2	B	439	444	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	407	408	first strand
Strand 2	B	421	422	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	453	first strand
Strand 2	B	460	461	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	491	first strand
Strand 2	B	735	737	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	496	498	first strand
Strand 2	B	730	732	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	646	648	first strand
Strand 2	B	700	705	parallel
Strand 3	B	500	505	anti-parallel
Strand 4	B	720	723	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	50	first strand
Strand 2	C	12	19	parallel
Strand 3	C	72	74	parallel
Strand 4	C	95	98	parallel
Strand 5	C	110	112	parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	164	first strand
Strand 2	C	132	137	parallel
Strand 3	C	191	195	parallel
Strand 4	C	219	222	parallel
Strand 5	C	241	246	parallel
Strand 6	C	357	363	anti-parallel
Strand 7	C	368	375	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	338	340	first strand
Strand 2	C	343	345	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	395	399	first strand
Strand 2	C	440	444	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	407	408	first strand
Strand 2	C	421	422	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	453	first strand
Strand 2	C	460	461	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	475	480	first strand
Strand 2	C	730	737	anti-parallel
Strand 3	C	489	491	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	475	480	first strand
Strand 2	C	730	737	anti-parallel
Strand 3	C	496	498	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	646	648	first strand
Strand 2	C	700	705	parallel
Strand 3	C	500	505	anti-parallel
Strand 4	C	720	723	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	50	first strand
Strand 2	D	11	19	parallel
Strand 3	D	72	74	parallel
Strand 4	D	95	98	parallel
Strand 5	D	110	112	parallel

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There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	164	first strand
Strand 2	D	132	137	parallel
Strand 3	D	191	195	parallel
Strand 4	D	219	222	parallel
Strand 5	D	241	246	parallel
Strand 6	D	358	363	anti-parallel
Strand 7	D	368	374	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	338	340	first strand
Strand 2	D	343	345	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	394	399	first strand
Strand 2	D	439	444	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	407	408	first strand
Strand 2	D	421	422	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	452	453	first strand
Strand 2	D	460	461	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	475	480	first strand
Strand 2	D	730	737	anti-parallel
Strand 3	D	489	491	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	475	480	first strand
Strand 2	D	730	737	anti-parallel
Strand 3	D	496	498	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	646	648	first strand
Strand 2	D	700	705	parallel
Strand 3	D	500	505	anti-parallel
Strand 4	D	720	723	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6RUQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6RUQ