Analysis of interatomic Contacts of Structural Units in PDB entry:
6RUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RUU entry

There are 3 chains in PDB entry 6RUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 153LEU 450
B
 SER 152PHE 452
C
 VAL 179GLU 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 6RUU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
154 162Right-handed alpha
Helix 2
AA2
A
166 168Right-handed 310
Helix 3
AA3
A
202 219Right-handed alpha
Helix 4
AA4
A
232 236Right-handed 310
Helix 5
AA5
A
248 254Right-handed alpha
Helix 6
AA6
A
263 283Right-handed alpha
Helix 7
AA7
A
342 349Right-handed alpha
Helix 8
AA8
A
353 370Right-handed alpha
Helix 9
AA9
A
382 394Right-handed alpha
Helix 10
AB1
A
395 400Right-handed alpha
Helix 11
AB2
A
401 403Right-handed 310
Helix 12
AB3
A
411 426Right-handed alpha
Helix 13
AB4
A
429 433Right-handed 310
Helix 14
AB5
A
435 449Right-handed alpha
Helix 15
AB6
B
154 162Right-handed alpha
Helix 16
AB7
B
166 168Right-handed 310
Helix 17
AB8
B
202 219Right-handed alpha
Helix 18
AB9
B
249 254Right-handed alpha
Helix 19
AC1
B
255 259Right-handed 310
Helix 20
AC2
B
263 283Right-handed alpha
Helix 21
AC3
B
329 333Right-handed 310
Helix 22
AC4
B
335 341Right-handed 310
Helix 23
AC5
B
342 347Right-handed alpha
Helix 24
AC6
B
354 369Right-handed alpha
Helix 25
AC7
B
382 394Right-handed alpha
Helix 26
AC8
B
398 403Right-handed 310
Helix 27
AC9
B
411 426Right-handed alpha
Helix 28
AD1
B
435 452Right-handed alpha
Helix 29
AD2
C
204 219Right-handed alpha
Helix 30
AD3
C
248 254Right-handed alpha
Helix 31
AD4
C
255 259Right-handed 310
Helix 32
AD5
C
263 283Right-handed alpha
Helix 33
AD6
C
337 341Right-handed 310
Helix 34
AD7
C
342 347Right-handed alpha
Helix 35
AD8
C
354 370Right-handed alpha
Helix 36
AD9
C
382 394Right-handed alpha
Helix 37
AE1
C
395 400Right-handed alpha
Helix 38
AE2
C
401 403Right-handed 310
Helix 39
AE3
C
411 426Right-handed alpha
Helix 40
AE4
C
429 433Right-handed 310
Helix 41
AE5
C
435 453Right-handed alpha
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There are 8 sheets in PDB entry 6RUU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 172first strand
Strand 2
A
177 184anti-parallel
Strand 3
A
187 194anti-parallel
Strand 4
A
238 242anti-parallel
Strand 5
A
229 231anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 290first strand
Strand 2
A
316 318anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 301first strand
Strand 2
A
307 309anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 173first strand
Strand 2
B
177 182anti-parallel
Strand 3
B
189 194anti-parallel
Strand 4
B
236 242anti-parallel
Strand 5
B
229 233anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 248first strand
Strand 2
B
300 301anti-parallel
Strand 3
B
307 308anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
288 290first strand
Strand 2
B
316 318anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
180 181first strand
Strand 2
C
189 191anti-parallel
Strand 3
C
241 242anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
299 301first strand
Strand 2
C
307 309anti-parallel
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