Analysis of interatomic Contacts of Structural Units in PDB entry:
6RV9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RV9 entry

There are 2 chains in PDB entry 6RV9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 79THR 458
B
 GLY 79THR 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6RV9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
110 129Right-handed alpha
Helix 2
AA2
A
206 211Right-handed alpha
Helix 3
AA3
A
215 219Right-handed 310
Helix 4
AA4
A
222 229Right-handed alpha
Helix 5
AA5
A
235 253Right-handed alpha
Helix 6
AA6
A
254 257Right-handed 310
Helix 7
AA7
A
270 283Right-handed alpha
Helix 8
AA8
A
301 311Right-handed alpha
Helix 9
AA9
A
317 325Right-handed alpha
Helix 10
AB1
A
329 335Right-handed 310
Helix 11
AB2
A
338 342Right-handed 310
Helix 12
AB3
A
345 352Right-handed alpha
Helix 13
AB4
A
366 369Right-handed 310
Helix 14
AB5
A
370 388Right-handed alpha
Helix 15
AB6
A
390 392Right-handed 310
Helix 16
AB7
A
408 410Right-handed 310
Helix 17
AB8
A
411 423Right-handed alpha
Helix 18
AB9
A
445 449Right-handed 310
Helix 19
AC1
B
110 129Right-handed alpha
Helix 20
AC2
B
206 211Right-handed alpha
Helix 21
AC3
B
215 219Right-handed 310
Helix 22
AC4
B
222 229Right-handed alpha
Helix 23
AC5
B
235 253Right-handed alpha
Helix 24
AC6
B
254 257Right-handed 310
Helix 25
AC7
B
270 283Right-handed alpha
Helix 26
AC8
B
301 311Right-handed alpha
Helix 27
AC9
B
317 325Right-handed alpha
Helix 28
AD1
B
329 335Right-handed 310
Helix 29
AD2
B
338 342Right-handed 310
Helix 30
AD3
B
345 352Right-handed alpha
Helix 31
AD4
B
366 369Right-handed 310
Helix 32
AD5
B
370 388Right-handed alpha
Helix 33
AD6
B
390 392Right-handed 310
Helix 34
AD7
B
408 410Right-handed 310
Helix 35
AD8
B
411 423Right-handed alpha
Helix 36
AD9
B
445 449Right-handed 310
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There are 4 sheets in PDB entry 6RV9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 147first strand
Strand 2
A
150 158anti-parallel
Strand 3
A
164 167anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 147first strand
Strand 2
A
150 158anti-parallel
Strand 3
A
170 172anti-parallel
Strand 4
A
201 205anti-parallel
Strand 5
A
183 189parallel
Strand 6
A
259 269parallel
Strand 7
A
288 292parallel
Strand 8
A
357 363parallel
Strand 9
A
394 399parallel
Strand 10
A
433 434parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 147first strand
Strand 2
B
150 160anti-parallel
Strand 3
B
163 167anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 147first strand
Strand 2
B
150 160anti-parallel
Strand 3
B
170 172anti-parallel
Strand 4
B
201 205anti-parallel
Strand 5
B
183 189parallel
Strand 6
B
259 269parallel
Strand 7
B
288 292parallel
Strand 8
B
357 363parallel
Strand 9
B
394 399parallel
Strand 10
B
433 434parallel
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