Analysis of interatomic Contacts of Structural Units in PDB entry:
6RXQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6RXQ entry

There are 8 chains in PDB entry 6RXQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 40	LYS 274
B	PRO -1	LYS 274
C	LYS 40	LYS 274
D	LYS 40	LYS 274
E	GLY 13	ILE 21
F	GLY 13	LEU 22
G	GLY 13	ILE 21
H	GLY 13	LYS 20

There are 44 helices in PDB entry 6RXQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	49	54	Right-handed alpha
Helix 2	AA2	A	72	76	Right-handed alpha
Helix 3	AA3	A	77	84	Right-handed alpha
Helix 4	AA4	A	84	100	Right-handed alpha
Helix 5	AA5	A	107	121	Right-handed alpha
Helix 6	AA6	A	133	139	Right-handed alpha
Helix 7	AA7	A	196	207	Right-handed alpha
Helix 8	AA8	A	221	223	Right-handed 310
Helix 9	AA9	A	224	232	Right-handed alpha
Helix 10	AB1	A	246	250	Right-handed 310
Helix 11	AB2	A	257	274	Right-handed alpha
Helix 12	AB3	B	49	56	Right-handed 310
Helix 13	AB4	B	72	76	Right-handed alpha
Helix 14	AB5	B	77	84	Right-handed alpha
Helix 15	AB6	B	84	100	Right-handed alpha
Helix 16	AB7	B	107	121	Right-handed alpha
Helix 17	AB8	B	133	139	Right-handed alpha
Helix 18	AB9	B	196	207	Right-handed alpha
Helix 19	AC1	B	221	223	Right-handed 310
Helix 20	AC2	B	224	232	Right-handed alpha
Helix 21	AC3	B	246	250	Right-handed 310
Helix 22	AC4	B	257	274	Right-handed alpha
Helix 23	AC5	C	49	54	Right-handed alpha
Helix 24	AC6	C	72	76	Right-handed alpha
Helix 25	AC7	C	77	84	Right-handed alpha
Helix 26	AC8	C	84	100	Right-handed alpha
Helix 27	AC9	C	107	121	Right-handed alpha
Helix 28	AD1	C	133	139	Right-handed alpha
Helix 29	AD2	C	196	207	Right-handed alpha
Helix 30	AD3	C	221	223	Right-handed 310
Helix 31	AD4	C	224	232	Right-handed alpha
Helix 32	AD5	C	246	250	Right-handed 310
Helix 33	AD6	C	257	274	Right-handed alpha
Helix 34	AD7	D	49	56	Right-handed 310
Helix 35	AD8	D	72	76	Right-handed alpha
Helix 36	AD9	D	77	84	Right-handed alpha
Helix 37	AE1	D	84	100	Right-handed alpha
Helix 38	AE2	D	107	121	Right-handed alpha
Helix 39	AE3	D	133	139	Right-handed alpha
Helix 40	AE4	D	196	207	Right-handed alpha
Helix 41	AE5	D	221	223	Right-handed 310
Helix 42	AE6	D	224	232	Right-handed alpha
Helix 43	AE7	D	246	250	Right-handed 310
Helix 44	AE8	D	257	274	Right-handed alpha

There are 16 sheets in PDB entry 6RXQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	144	145	first strand
Strand 2	A	124	128	parallel
Strand 3	A	43	47	parallel
Strand 4	A	209	213	parallel
Strand 5	A	235	240	parallel
Strand 6	A	252	255	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	67	first strand
Strand 2	A	70	71	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	163	first strand
Strand 2	A	148	155	anti-parallel
Strand 3	A	183	187	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	219	220	first strand
Strand 2	E	17	18	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	145	first strand
Strand 2	B	124	128	parallel
Strand 3	B	43	47	parallel
Strand 4	B	209	213	parallel
Strand 5	B	235	240	parallel
Strand 6	B	252	255	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	67	first strand
Strand 2	B	70	71	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	163	first strand
Strand 2	B	148	155	anti-parallel
Strand 3	B	183	187	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	219	220	first strand
Strand 2	F	17	18	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	144	145	first strand
Strand 2	C	124	128	parallel
Strand 3	C	43	47	parallel
Strand 4	C	209	213	parallel
Strand 5	C	235	240	parallel
Strand 6	C	252	255	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	67	first strand
Strand 2	C	70	71	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	161	163	first strand
Strand 2	C	148	155	anti-parallel
Strand 3	C	183	187	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	219	220	first strand
Strand 2	G	17	18	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	144	145	first strand
Strand 2	D	124	128	parallel
Strand 3	D	43	47	parallel
Strand 4	D	209	213	parallel
Strand 5	D	235	240	parallel
Strand 6	D	252	255	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	67	first strand
Strand 2	D	70	71	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	163	first strand
Strand 2	D	148	155	anti-parallel
Strand 3	D	183	187	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	219	220	first strand
Strand 2	H	17	18	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6RXQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6RXQ