Analysis of interatomic Contacts of Structural Units in PDB entry:
6RY6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RY6 entry

There is 1 chain in PDB entry 6RY6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 32PHE 441
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 6RY6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 55Right-handed alpha
Helix 2
AA2
A
72 76Right-handed 310
Helix 3
AA3
A
81 100Right-handed alpha
Helix 4
AA4
A
104 115Right-handed alpha
Helix 5
AA5
A
124 131Right-handed 310
Helix 6
AA6
A
132 149Right-handed alpha
Helix 7
AA7
A
160 173Right-handed alpha
Helix 8
AA8
A
174 178Right-handed 310
Helix 9
AA9
A
180 184Right-handed 310
Helix 10
AB1
A
202 220Right-handed alpha
Helix 11
AB2
A
221 238Right-handed alpha
Helix 12
AB3
A
255 257Right-handed 310
Helix 13
AB4
A
266 285Right-handed alpha
Helix 14
AB5
A
286 304Right-handed alpha
Helix 15
AB6
A
325 327Right-handed 310
Helix 16
AB7
A
328 344Right-handed alpha
Helix 17
AB8
A
347 365Right-handed alpha
Helix 18
AB9
A
386 391Right-handed 310
Helix 19
AC1
A
394 408Right-handed alpha
Helix 20
AC2
A
409 413Right-handed 310
Helix 21
AC3
A
436 441Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 6RY6. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 201first strand
Strand 2
A
251 253anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 306first strand
Strand 2
A
309 310anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il