Analysis of interatomic Contacts of Structural Units in PDB entry:
6RZA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6RZA entry

There are 5 chains in PDB entry 6RZA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
X	ALA 70	GLU 232
A	MET 1	VAL 437
B	MET 1	GLN 426
C	MET 1	VAL 437
D	MET 1	GLN 426

There are 74 helices in PDB entry 6RZA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	X	70	97	Right-handed alpha
Helix 2	AA2	X	100	108	Right-handed alpha
Helix 3	AA3	X	112	127	Right-handed alpha
Helix 4	AA4	X	146	156	Right-handed alpha
Helix 5	AA5	X	158	166	Right-handed alpha
Helix 6	AA6	X	172	180	Right-handed alpha
Helix 7	AA7	X	190	198	Right-handed alpha
Helix 8	AA8	X	198	232	Right-handed alpha
Helix 9	AA9	A	10	29	Right-handed alpha
Helix 10	AB1	A	71	79	Right-handed alpha
Helix 11	AB2	A	102	107	Right-handed alpha
Helix 12	AB3	A	110	129	Right-handed alpha
Helix 13	AB4	A	144	161	Right-handed alpha
Helix 14	AB5	A	182	195	Right-handed alpha
Helix 15	AB6	A	206	216	Right-handed alpha
Helix 16	AB7	A	223	244	Right-handed alpha
Helix 17	AB8	A	251	260	Right-handed alpha
Helix 18	AB9	A	287	296	Right-handed alpha
Helix 19	AC1	A	324	338	Right-handed alpha
Helix 20	AC2	A	384	402	Right-handed alpha
Helix 21	AC3	A	404	410	Right-handed alpha
Helix 22	AC4	A	414	437	Right-handed alpha
Helix 23	AC5	B	10	28	Right-handed alpha
Helix 24	AC6	B	40	46	Right-handed alpha
Helix 25	AC7	B	47	49	Right-handed 310
Helix 26	AC8	B	70	79	Right-handed alpha
Helix 27	AC9	B	81	85	Right-handed 310
Helix 28	AD1	B	100	106	Right-handed alpha
Helix 29	AD2	B	109	126	Right-handed alpha
Helix 30	AD3	B	145	159	Right-handed alpha
Helix 31	AD4	B	180	193	Right-handed alpha
Helix 32	AD5	B	204	214	Right-handed alpha
Helix 33	AD6	B	221	242	Right-handed alpha
Helix 34	AD7	B	249	258	Right-handed alpha
Helix 35	AD8	B	285	295	Right-handed alpha
Helix 36	AD9	B	296	299	Right-handed 310
Helix 37	AE1	B	322	337	Right-handed alpha
Helix 38	AE2	B	374	391	Right-handed alpha
Helix 39	AE3	B	394	400	Right-handed alpha
Helix 40	AE4	B	404	425	Right-handed alpha
Helix 41	AE5	C	10	29	Right-handed alpha
Helix 42	AE6	C	71	79	Right-handed alpha
Helix 43	AE7	C	102	107	Right-handed alpha
Helix 44	AE8	C	110	129	Right-handed alpha
Helix 45	AE9	C	144	161	Right-handed alpha
Helix 46	AF1	C	182	195	Right-handed alpha
Helix 47	AF2	C	206	216	Right-handed alpha
Helix 48	AF3	C	223	244	Right-handed alpha
Helix 49	AF4	C	251	260	Right-handed alpha
Helix 50	AF5	C	287	296	Right-handed alpha
Helix 51	AF6	C	324	338	Right-handed alpha
Helix 52	AF7	C	384	402	Right-handed alpha
Helix 53	AF8	C	404	410	Right-handed alpha
Helix 54	AF9	C	414	437	Right-handed alpha
Helix 55	AG1	D	10	28	Right-handed alpha
Helix 56	AG2	D	40	46	Right-handed alpha
Helix 57	AG3	D	47	49	Right-handed 310
Helix 58	AG4	D	71	79	Right-handed alpha
Helix 59	AG5	D	81	85	Right-handed 310
Helix 60	AG6	D	86	88	Right-handed 310
Helix 61	AG7	D	100	106	Right-handed alpha
Helix 62	AG8	D	109	126	Right-handed alpha
Helix 63	AG9	D	145	159	Right-handed alpha
Helix 64	AH1	D	180	193	Right-handed alpha
Helix 65	AH2	D	204	214	Right-handed alpha
Helix 66	AH3	D	221	242	Right-handed alpha
Helix 67	AH4	D	249	258	Right-handed alpha
Helix 68	AH5	D	278	282	Right-handed 310
Helix 69	AH6	D	285	295	Right-handed alpha
Helix 70	AH7	D	296	299	Right-handed 310
Helix 71	AH8	D	322	337	Right-handed alpha
Helix 72	AH9	D	374	391	Right-handed alpha
Helix 73	AI1	D	394	400	Right-handed alpha
Helix 74	AI2	D	404	425	Right-handed alpha

There are 16 sheets in PDB entry 6RZA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	131	133	first strand
Strand 2	X	143	145	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	94	first strand
Strand 2	A	65	69	parallel
Strand 3	A	2	9	parallel
Strand 4	A	131	139	parallel
Strand 5	A	165	172	parallel
Strand 6	A	200	205	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	54	first strand
Strand 2	A	62	63	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	272	273	first strand
Strand 2	A	373	377	anti-parallel
Strand 3	A	317	321	anti-parallel
Strand 4	A	353	356	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	312	314	first strand
Strand 2	A	380	381	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	63	67	parallel
Strand 3	B	3	9	parallel
Strand 4	B	130	137	parallel
Strand 5	B	163	166	parallel
Strand 6	B	198	200	parallel
Strand 7	B	265	268	parallel
Strand 8	B	368	371	anti-parallel
Strand 9	B	310	313	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	54	first strand
Strand 2	B	58	61	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	170	first strand
Strand 2	B	202	203	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	244	246	first strand
Strand 2	B	351	354	anti-parallel
Strand 3	B	315	319	parallel
Strand 4	B	363	364	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	94	first strand
Strand 2	C	65	69	parallel
Strand 3	C	2	9	parallel
Strand 4	C	131	139	parallel
Strand 5	C	165	172	parallel
Strand 6	C	200	205	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	55	first strand
Strand 2	C	61	63	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	272	273	first strand
Strand 2	C	373	381	anti-parallel
Strand 3	C	312	321	anti-parallel
Strand 4	C	351	356	parallel

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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	90	92	first strand
Strand 2	D	63	67	parallel
Strand 3	D	3	9	parallel
Strand 4	D	130	137	parallel
Strand 5	D	163	166	parallel
Strand 6	D	198	200	parallel
Strand 7	D	265	268	parallel
Strand 8	D	368	371	anti-parallel
Strand 9	D	310	313	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	54	first strand
Strand 2	D	58	61	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	170	first strand
Strand 2	D	202	203	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	244	246	first strand
Strand 2	D	351	354	anti-parallel
Strand 3	D	315	319	parallel
Strand 4	D	363	364	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6RZA

Analysis of interatomic Contacts of Structural Units in PDB entry:
6RZA