Analysis of interatomic Contacts of Structural Units in PDB entry:
6S0B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6S0B entry

There are 3 chains in PDB entry 6S0B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 254ALA 472
B
 ASP 28CYS 132
C
 SER 1516ASN 1663
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 6S0B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
52 57Right-handed alpha
Helix 2
AA2
C
1528 1536Right-handed alpha
Helix 3
AA3
C
1587 1589Right-handed 310
Helix 4
AA4
C
1590 1595Right-handed alpha
Helix 5
AA5
C
1609 1611Right-handed 310
Helix 6
AA6
C
1635 1639Right-handed 310
Helix 7
AA7
C
1642 1660Right-handed alpha
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There are 7 sheets in PDB entry 6S0B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 265first strand
Strand 2
A
275 281anti-parallel
Strand 3
A
301 307anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 318first strand
Strand 2
A
350 351anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
342 347first strand
Strand 2
A
365 372anti-parallel
Strand 3
A
426 432parallel
Strand 4
A
417 419anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 438first strand
Strand 2
A
377 382parallel
Strand 3
A
400 409anti-parallel
Strand 4
A
448 454anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 51first strand
Strand 2
B
30 37anti-parallel
Strand 3
B
63 65anti-parallel
Strand 4
B
73 74anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 80first strand
Strand 2
B
95 105anti-parallel
Strand 3
B
120 128anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1620 1621first strand
Strand 2
C
1581 1586parallel
Strand 3
C
1559 1570anti-parallel
Strand 4
C
1541 1551anti-parallel
Strand 5
C
1601 1607anti-parallel
Strand 6
C
1627 1631anti-parallel
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