Analysis of interatomic Contacts of Structural Units in PDB entry:
6S1L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6S1L entry

There is 1 chain in PDB entry 6S1L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 20VAL 422
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6S1L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 40Right-handed alpha
Helix 2
AA2
A
152 154Right-handed 310
Helix 3
AA3
A
162 164Right-handed 310
Helix 4
AA4
A
356 358Right-handed 310
Helix 5
AA5
A
413 418Right-handed alpha
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There are 7 sheets in PDB entry 6S1L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 48first strand
Strand 2
A
406 412anti-parallel
Strand 3
A
398 402anti-parallel
Strand 4
A
385 390anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 64first strand
Strand 2
A
70 77anti-parallel
Strand 3
A
87 97anti-parallel
Strand 4
A
122 130anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 140first strand
Strand 2
A
143 150anti-parallel
Strand 3
A
156 160anti-parallel
Strand 4
A
176 178anti-parallel
Strand 5
A
223 225parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 190first strand
Strand 2
A
197 202anti-parallel
Strand 3
A
207 211anti-parallel
Strand 4
A
229 231anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 243first strand
Strand 2
A
250 255anti-parallel
Strand 3
A
259 264anti-parallel
Strand 4
A
275 278anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 289first strand
Strand 2
A
296 301anti-parallel
Strand 3
A
306 310anti-parallel
Strand 4
A
317 321anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 333first strand
Strand 2
A
340 345anti-parallel
Strand 3
A
350 354anti-parallel
Strand 4
A
374 378anti-parallel
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