Analysis of interatomic Contacts of Structural Units in PDB entry:
6S1Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6S1Y entry

There is 1 chain in PDB entry 6S1Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 36SER 630
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6S1Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 69Right-handed alpha
Helix 2
AA2
A
71 97Right-handed alpha
Helix 3
AA3
A
106 117Right-handed alpha
Helix 4
AA4
A
119 124Right-handed 310
Helix 5
AA5
A
125 146Right-handed alpha
Helix 6
AA6
A
163 172Right-handed alpha
Helix 7
AA7
A
174 190Right-handed alpha
Helix 8
AA8
A
193 211Right-handed alpha
Helix 9
AA9
A
215 223Right-handed alpha
Helix 10
AB1
A
228 260Right-handed alpha
Helix 11
AB2
A
273 275Right-handed 310
Helix 12
AB3
A
283 287Right-handed 310
Helix 13
AB4
A
301 308Right-handed alpha
Helix 14
AB5
A
311 326Right-handed alpha
Helix 15
AB6
A
332 339Right-handed alpha
Helix 16
AB7
A
374 395Right-handed alpha
Helix 17
AB8
A
398 402Right-handed 310
Helix 18
AB9
A
406 422Right-handed alpha
Helix 19
AC1
A
423 430Right-handed alpha
Helix 20
AC2
A
439 455Right-handed alpha
Helix 21
AC3
A
456 473Right-handed alpha
Helix 22
AC4
A
477 479Right-handed 310
Helix 23
AC5
A
480 494Right-handed alpha
Helix 24
AC6
A
507 510Right-handed 310
Helix 25
AC7
A
511 516Right-handed alpha
Helix 26
AC8
A
520 541Right-handed alpha
Helix 27
AC9
A
561 574Right-handed alpha
Helix 28
AD1
A
579 589Right-handed alpha
Helix 29
AD2
A
595 602Right-handed alpha
Helix 30
AD3
A
602 617Right-handed alpha
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There are 3 sheets in PDB entry 6S1Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 271first strand
Strand 2
A
495 496parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 358first strand
Strand 2
A
365 368anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
501 502first strand
Strand 2
A
628 629parallel
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