Analysis of interatomic Contacts of Structural Units in PDB entry:
6S3R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6S3R entry

There are 11 chains in PDB entry 6S3R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 55VAL 250
B
 THR 53VAL 250
C
 THR 53VAL 250
D
 THR 53VAL 250
E
 THR 53VAL 250
F
 ILE 10ARG 261
G
 MET 1GLY 89
H
 MET 1GLY 89
I
 MET 1GLY 89
J
 MET 1GLY 89
K
 MET 1GLY 89
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 69 helices in PDB entry 6S3R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 66Right-handed alpha
Helix 2
AA2
A
67 82Right-handed alpha
Helix 3
AA3
A
91 116Right-handed alpha
Helix 4
AA4
A
118 122Right-handed 310
Helix 5
AA5
A
129 144Right-handed alpha
Helix 6
AA6
A
147 159Right-handed alpha
Helix 7
AA7
A
174 211Right-handed alpha
Helix 8
AA8
A
217 233Right-handed alpha
Helix 9
AA9
A
235 248Right-handed alpha
Helix 10
AB1
B
57 62Right-handed alpha
Helix 11
AB2
B
67 82Right-handed alpha
Helix 12
AB3
B
90 105Right-handed alpha
Helix 13
AB4
B
105 116Right-handed alpha
Helix 14
AB5
B
129 144Right-handed alpha
Helix 15
AB6
B
147 159Right-handed alpha
Helix 16
AB7
B
173 211Right-handed alpha
Helix 17
AB8
B
217 233Right-handed alpha
Helix 18
AB9
B
235 248Right-handed alpha
Helix 19
AC1
C
54 65Right-handed alpha
Helix 20
AC2
C
67 82Right-handed alpha
Helix 21
AC3
C
91 116Right-handed alpha
Helix 22
AC4
C
118 122Right-handed 310
Helix 23
AC5
C
129 146Right-handed alpha
Helix 24
AC6
C
147 159Right-handed alpha
Helix 25
AC7
C
170 211Right-handed alpha
Helix 26
AC8
C
217 233Right-handed alpha
Helix 27
AC9
C
235 248Right-handed alpha
Helix 28
AD1
D
54 65Right-handed alpha
Helix 29
AD2
D
67 82Right-handed alpha
Helix 30
AD3
D
91 105Right-handed alpha
Helix 31
AD4
D
105 116Right-handed alpha
Helix 32
AD5
D
118 122Right-handed 310
Helix 33
AD6
D
129 146Right-handed alpha
Helix 34
AD7
D
147 159Right-handed alpha
Helix 35
AD8
D
170 211Right-handed alpha
Helix 36
AD9
D
217 233Right-handed alpha
Helix 37
AE1
D
235 248Right-handed alpha
Helix 38
AE2
E
54 62Right-handed alpha
Helix 39
AE3
E
67 82Right-handed alpha
Helix 40
AE4
E
91 116Right-handed alpha
Helix 41
AE5
E
118 122Right-handed 310
Helix 42
AE6
E
129 146Right-handed alpha
Helix 43
AE7
E
147 159Right-handed alpha
Helix 44
AE8
E
173 211Right-handed alpha
Helix 45
AE9
E
217 233Right-handed alpha
Helix 46
AF1
E
235 248Right-handed alpha
Helix 47
AF2
F
20 32Right-handed alpha
Helix 48
AF3
F
42 58Right-handed alpha
Helix 49
AF4
F
73 111Right-handed alpha
Helix 50
AF5
F
129 144Right-handed alpha
Helix 51
AF6
F
145 161Right-handed alpha
Helix 52
AF7
F
172 177Right-handed alpha
Helix 53
AF8
F
177 211Right-handed alpha
Helix 54
AF9
F
219 260Right-handed alpha
Helix 55
AG1
G
2 42Right-handed alpha
Helix 56
AG2
G
51 66Right-handed alpha
Helix 57
AG3
G
66 88Right-handed alpha
Helix 58
AG4
H
2 42Right-handed alpha
Helix 59
AG5
H
51 66Right-handed alpha
Helix 60
AG6
H
66 88Right-handed alpha
Helix 61
AG7
I
2 42Right-handed alpha
Helix 62
AG8
I
51 66Right-handed alpha
Helix 63
AG9
I
66 88Right-handed alpha
Helix 64
AH1
J
2 42Right-handed alpha
Helix 65
AH2
J
51 66Right-handed alpha
Helix 66
AH3
J
66 88Right-handed alpha
Helix 67
AH4
K
3 35Right-handed alpha
Helix 68
AH5
K
53 66Right-handed alpha
Helix 69
AH6
K
66 89Right-handed alpha
Back to top of page
There are no sheets in PDB entry 6S3R
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il