Analysis of interatomic Contacts of Structural Units in PDB entry:
6S3V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6S3V entry

There is 1 chain in PDB entry 6S3V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4HIS 395
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6S3V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 28Right-handed 310
Helix 2
AA2
A
32 36Right-handed 310
Helix 3
AA3
A
37 45Right-handed alpha
Helix 4
AA4
A
59 73Right-handed alpha
Helix 5
AA5
A
79 87Right-handed alpha
Helix 6
AA6
A
100 105Right-handed alpha
Helix 7
AA7
A
115 130Right-handed alpha
Helix 8
AA8
A
131 142Right-handed alpha
Helix 9
AA9
A
146 150Right-handed 310
Helix 10
AB1
A
169 174Right-handed 310
Helix 11
AB2
A
176 192Right-handed alpha
Helix 12
AB3
A
221 231Right-handed alpha
Helix 13
AB4
A
232 237Right-handed alpha
Helix 14
AB5
A
240 246Right-handed alpha
Helix 15
AB6
A
246 255Right-handed alpha
Helix 16
AB7
A
289 296Right-handed alpha
Helix 17
AB8
A
296 303Right-handed alpha
Helix 18
AB9
A
305 309Right-handed 310
Helix 19
AC1
A
311 315Right-handed 310
Helix 20
AC2
A
322 326Right-handed 310
Helix 21
AC3
A
360 364Right-handed 310
Helix 22
AC4
A
372 386Right-handed alpha
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There are 3 sheets in PDB entry 6S3V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 52first strand
Strand 2
A
11 14parallel
Strand 3
A
108 113parallel
Strand 4
A
156 162parallel
Strand 5
A
264 270parallel
Strand 6
A
349 355parallel
Strand 7
A
337 339parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 77first strand
Strand 2
A
91 95anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 275first strand
Strand 2
A
282 284anti-parallel
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