Analysis of interatomic Contacts of Structural Units in PDB entry:
6S5K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6S5K entry

There is 1 chain in PDB entry 6S5K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 219VAL 459
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6S5K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
221 244Right-handed alpha
Helix 2
AA2
A
264 288Right-handed alpha
Helix 3
AA3
A
291 295Right-handed 310
Helix 4
AA4
A
296 319Right-handed alpha
Helix 5
AA5
A
336 343Right-handed alpha
Helix 6
AA6
A
346 364Right-handed alpha
Helix 7
AA7
A
366 379Right-handed alpha
Helix 8
AA8
A
388 411Right-handed alpha
Helix 9
AA9
A
416 442Right-handed alpha
Helix 10
AB1
A
450 458Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6S5K.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 321first strand
Strand 2
A
326 328anti-parallel
Strand 3
A
334 335anti-parallel
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