Analysis of interatomic Contacts of Structural Units in PDB entry:
6S67

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6S67 entry

There are 8 chains in PDB entry 6S67 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 7	VAL 64
A	ALA 68	ALA 232
B	LEU 7	VAL 64
B	ALA 68	ALA 232
C	LEU 7	VAL 64
C	ALA 68	ALA 232
D	LEU 7	VAL 64
D	ALA 68	ALA 232

There are 20 helices in PDB entry 6S67. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	57	61	Right-handed 310
Helix 2	AA2	A	68	72	Right-handed 310
Helix 3	AA3	A	80	85	Right-handed alpha
Helix 4	AA4	A	154	157	Right-handed 310
Helix 5	AA5	A	226	231	Right-handed alpha
Helix 6	AA6	B	57	61	Right-handed 310
Helix 7	AA7	B	68	72	Right-handed 310
Helix 8	AA8	B	80	85	Right-handed alpha
Helix 9	AA9	B	154	157	Right-handed 310
Helix 10	AB1	B	226	231	Right-handed alpha
Helix 11	AB2	C	57	61	Right-handed 310
Helix 12	AB3	C	68	72	Right-handed 310
Helix 13	AB4	C	80	85	Right-handed alpha
Helix 14	AB5	C	154	157	Right-handed 310
Helix 15	AB6	C	226	231	Right-handed alpha
Helix 16	AB7	D	57	61	Right-handed 310
Helix 17	AB8	D	68	72	Right-handed 310
Helix 18	AB9	D	80	85	Right-handed alpha
Helix 19	AC1	D	154	157	Right-handed 310
Helix 20	AC2	D	226	231	Right-handed alpha

There are 4 sheets in PDB entry 6S67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	22	first strand
Strand 2	A	25	35	anti-parallel
Strand 3	A	41	48	anti-parallel
Strand 4	A	215	225	anti-parallel
Strand 5	A	197	206	anti-parallel
Strand 6	A	146	153	anti-parallel
Strand 7	A	158	168	anti-parallel
Strand 8	A	174	185	anti-parallel
Strand 9	A	90	98	anti-parallel
Strand 10	A	103	113	anti-parallel
Strand 11	A	116	126	anti-parallel
Strand 12	A	12	22	parallel

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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	12	22	first strand
Strand 2	B	25	35	anti-parallel
Strand 3	B	41	48	anti-parallel
Strand 4	B	215	225	anti-parallel
Strand 5	B	197	206	anti-parallel
Strand 6	B	146	153	anti-parallel
Strand 7	B	158	168	anti-parallel
Strand 8	B	174	185	anti-parallel
Strand 9	B	90	98	anti-parallel
Strand 10	B	103	113	anti-parallel
Strand 11	B	116	126	anti-parallel
Strand 12	B	12	22	parallel

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There are 12 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	12	22	first strand
Strand 2	C	25	35	anti-parallel
Strand 3	C	41	48	anti-parallel
Strand 4	C	215	225	anti-parallel
Strand 5	C	197	206	anti-parallel
Strand 6	C	146	153	anti-parallel
Strand 7	C	158	168	anti-parallel
Strand 8	C	174	185	anti-parallel
Strand 9	C	90	98	anti-parallel
Strand 10	C	103	113	anti-parallel
Strand 11	C	116	126	anti-parallel
Strand 12	C	12	22	parallel

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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	22	first strand
Strand 2	D	25	35	anti-parallel
Strand 3	D	41	48	anti-parallel
Strand 4	D	215	225	anti-parallel
Strand 5	D	197	206	anti-parallel
Strand 6	D	146	153	anti-parallel
Strand 7	D	158	168	anti-parallel
Strand 8	D	174	185	anti-parallel
Strand 9	D	90	98	anti-parallel
Strand 10	D	103	113	anti-parallel
Strand 11	D	116	126	anti-parallel
Strand 12	D	12	22	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6S67

Analysis of interatomic Contacts of Structural Units in PDB entry:
6S67