Analysis of interatomic Contacts of Structural Units in PDB entry:
6S7J

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6S7J entry

There are 8 chains in PDB entry 6S7J (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 2	ILE 498
B	ASP 2	ILE 498
C	ASP 3	ILE 498
D	ASP 2	ILE 498
E	ASP 2	ILE 498
F	ALA 3	ILE 498
G	ASP 2	ILE 498
H	ALA 3	ILE 498

There are210 helices in PDB entry 6S7J. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	23	Right-handed alpha
Helix 2	AA2	A	29	50	Right-handed alpha
Helix 3	AA3	A	60	66	Right-handed 310
Helix 4	AA4	A	69	71	Right-handed 310
Helix 5	AA5	A	72	84	Right-handed alpha
Helix 6	AA6	A	93	109	Right-handed alpha
Helix 7	AA7	A	116	129	Right-handed alpha
Helix 8	AA8	A	149	157	Right-handed alpha
Helix 9	AA9	A	171	178	Right-handed alpha
Helix 10	AB1	A	188	195	Right-handed alpha
Helix 11	AB2	A	197	230	Right-handed alpha
Helix 12	AB3	A	233	236	Right-handed 310
Helix 13	AB4	A	237	243	Right-handed alpha
Helix 14	AB5	A	246	260	Right-handed alpha
Helix 15	AB6	A	263	267	Right-handed 310
Helix 16	AB7	A	277	282	Right-handed alpha
Helix 17	AB8	A	282	305	Right-handed alpha
Helix 18	AB9	A	316	319	Right-handed 310
Helix 19	AC1	A	329	358	Right-handed alpha
Helix 20	AC2	A	359	364	Right-handed alpha
Helix 21	AC3	A	366	370	Right-handed 310
Helix 22	AC4	A	381	395	Right-handed alpha
Helix 23	AC5	A	396	398	Right-handed 310
Helix 24	AC6	A	417	451	Right-handed alpha
Helix 25	AC7	A	456	470	Right-handed alpha
Helix 26	AC8	A	478	492	Right-handed alpha
Helix 27	AC9	B	12	23	Right-handed alpha
Helix 28	AD1	B	29	48	Right-handed alpha
Helix 29	AD2	B	60	66	Right-handed 310
Helix 30	AD3	B	69	71	Right-handed 310
Helix 31	AD4	B	72	85	Right-handed alpha
Helix 32	AD5	B	93	109	Right-handed alpha
Helix 33	AD6	B	116	129	Right-handed alpha
Helix 34	AD7	B	149	157	Right-handed alpha
Helix 35	AD8	B	171	179	Right-handed alpha
Helix 36	AD9	B	188	195	Right-handed alpha
Helix 37	AE1	B	197	230	Right-handed alpha
Helix 38	AE2	B	233	236	Right-handed 310
Helix 39	AE3	B	237	245	Right-handed alpha
Helix 40	AE4	B	246	260	Right-handed alpha
Helix 41	AE5	B	263	267	Right-handed 310
Helix 42	AE6	B	277	282	Right-handed alpha
Helix 43	AE7	B	282	305	Right-handed alpha
Helix 44	AE8	B	316	319	Right-handed 310
Helix 45	AE9	B	329	358	Right-handed alpha
Helix 46	AF1	B	359	364	Right-handed alpha
Helix 47	AF2	B	366	370	Right-handed 310
Helix 48	AF3	B	381	398	Right-handed alpha
Helix 49	AF4	B	417	451	Right-handed alpha
Helix 50	AF5	B	456	470	Right-handed alpha
Helix 51	AF6	B	478	492	Right-handed alpha
Helix 52	AF7	B	493	498	Right-handed 310
Helix 53	AF8	C	12	23	Right-handed alpha
Helix 54	AF9	C	29	50	Right-handed alpha
Helix 55	AG1	C	60	66	Right-handed 310
Helix 56	AG2	C	69	71	Right-handed 310
Helix 57	AG3	C	72	84	Right-handed alpha
Helix 58	AG4	C	93	109	Right-handed alpha
Helix 59	AG5	C	116	130	Right-handed alpha
Helix 60	AG6	C	148	157	Right-handed alpha
Helix 61	AG7	C	171	179	Right-handed alpha
Helix 62	AG8	C	188	195	Right-handed alpha
Helix 63	AG9	C	197	230	Right-handed alpha
Helix 64	AH1	C	233	236	Right-handed 310
Helix 65	AH2	C	237	245	Right-handed alpha
Helix 66	AH3	C	246	260	Right-handed alpha
Helix 67	AH4	C	263	267	Right-handed 310
Helix 68	AH5	C	277	282	Right-handed alpha
Helix 69	AH6	C	282	305	Right-handed alpha
Helix 70	AH7	C	316	319	Right-handed 310
Helix 71	AH8	C	329	358	Right-handed alpha
Helix 72	AH9	C	359	364	Right-handed alpha
Helix 73	AI1	C	366	370	Right-handed 310
Helix 74	AI2	C	381	395	Right-handed alpha
Helix 75	AI3	C	396	398	Right-handed 310
Helix 76	AI4	C	417	451	Right-handed alpha
Helix 77	AI5	C	456	470	Right-handed alpha
Helix 78	AI6	C	478	492	Right-handed alpha
Helix 79	AI7	C	493	498	Right-handed 310
Helix 80	AI8	D	12	21	Right-handed alpha
Helix 81	AI9	D	29	50	Right-handed alpha
Helix 82	AJ1	D	60	66	Right-handed 310
Helix 83	AJ2	D	69	71	Right-handed 310
Helix 84	AJ3	D	72	85	Right-handed alpha
Helix 85	AJ4	D	93	109	Right-handed alpha
Helix 86	AJ5	D	116	129	Right-handed alpha
Helix 87	AJ6	D	148	157	Right-handed alpha
Helix 88	AJ7	D	171	179	Right-handed alpha
Helix 89	AJ8	D	188	195	Right-handed alpha
Helix 90	AJ9	D	197	230	Right-handed alpha
Helix 91	AK1	D	233	236	Right-handed 310
Helix 92	AK2	D	237	245	Right-handed alpha
Helix 93	AK3	D	246	260	Right-handed alpha
Helix 94	AK4	D	263	267	Right-handed 310
Helix 95	AK5	D	277	282	Right-handed alpha
Helix 96	AK6	D	282	305	Right-handed alpha
Helix 97	AK7	D	329	358	Right-handed alpha
Helix 98	AK8	D	359	364	Right-handed alpha
Helix 99	AK9	D	366	370	Right-handed 310
Helix 100	AL1	D	381	395	Right-handed alpha
Helix 101	AL2	D	396	398	Right-handed 310
Helix 102	AL3	D	417	450	Right-handed alpha
Helix 103	AL4	D	456	470	Right-handed alpha
Helix 104	AL5	D	478	492	Right-handed alpha
Helix 105	AL6	D	493	498	Right-handed 310
Helix 106	AL7	E	12	21	Right-handed alpha
Helix 107	AL8	E	29	50	Right-handed alpha
Helix 108	AL9	E	60	66	Right-handed 310
Helix 109	AM1	E	69	71	Right-handed 310
Helix 110	AM2	E	72	85	Right-handed alpha
Helix 111	AM3	E	93	109	Right-handed alpha
Helix 112	AM4	E	116	130	Right-handed alpha
Helix 113	AM5	E	149	157	Right-handed alpha
Helix 114	AM6	E	171	179	Right-handed alpha
Helix 115	AM7	E	188	195	Right-handed alpha
Helix 116	AM8	E	197	230	Right-handed alpha
Helix 117	AM9	E	233	236	Right-handed 310
Helix 118	AN1	E	237	245	Right-handed alpha
Helix 119	AN2	E	246	260	Right-handed alpha
Helix 120	AN3	E	263	267	Right-handed 310
Helix 121	AN4	E	277	282	Right-handed alpha
Helix 122	AN5	E	282	305	Right-handed alpha
Helix 123	AN6	E	316	319	Right-handed 310
Helix 124	AN7	E	329	358	Right-handed alpha
Helix 125	AN8	E	359	364	Right-handed alpha
Helix 126	AN9	E	366	370	Right-handed 310
Helix 127	AO1	E	381	397	Right-handed alpha
Helix 128	AO2	E	417	451	Right-handed alpha
Helix 129	AO3	E	456	470	Right-handed alpha
Helix 130	AO4	E	478	492	Right-handed alpha
Helix 131	AO5	E	493	498	Right-handed 310
Helix 132	AO6	F	12	21	Right-handed alpha
Helix 133	AO7	F	29	50	Right-handed alpha
Helix 134	AO8	F	60	66	Right-handed 310
Helix 135	AO9	F	69	71	Right-handed 310
Helix 136	AP1	F	72	85	Right-handed alpha
Helix 137	AP2	F	93	109	Right-handed alpha
Helix 138	AP3	F	116	129	Right-handed alpha
Helix 139	AP4	F	148	157	Right-handed alpha
Helix 140	AP5	F	171	179	Right-handed alpha
Helix 141	AP6	F	188	195	Right-handed alpha
Helix 142	AP7	F	197	230	Right-handed alpha
Helix 143	AP8	F	233	236	Right-handed 310
Helix 144	AP9	F	237	245	Right-handed alpha
Helix 145	AQ1	F	246	260	Right-handed alpha
Helix 146	AQ2	F	263	267	Right-handed 310
Helix 147	AQ3	F	277	282	Right-handed alpha
Helix 148	AQ4	F	282	305	Right-handed alpha
Helix 149	AQ5	F	316	319	Right-handed 310
Helix 150	AQ6	F	329	358	Right-handed alpha
Helix 151	AQ7	F	359	364	Right-handed alpha
Helix 152	AQ8	F	366	370	Right-handed 310
Helix 153	AQ9	F	381	395	Right-handed alpha
Helix 154	AR1	F	396	398	Right-handed 310
Helix 155	AR2	F	417	451	Right-handed alpha
Helix 156	AR3	F	456	470	Right-handed alpha
Helix 157	AR4	F	478	492	Right-handed alpha
Helix 158	AR5	F	493	497	Right-handed 310
Helix 159	AR6	G	12	23	Right-handed alpha
Helix 160	AR7	G	29	50	Right-handed alpha
Helix 161	AR8	G	60	66	Right-handed 310
Helix 162	AR9	G	69	71	Right-handed 310
Helix 163	AS1	G	72	85	Right-handed alpha
Helix 164	AS2	G	93	109	Right-handed alpha
Helix 165	AS3	G	116	130	Right-handed alpha
Helix 166	AS4	G	149	157	Right-handed alpha
Helix 167	AS5	G	171	179	Right-handed alpha
Helix 168	AS6	G	188	195	Right-handed alpha
Helix 169	AS7	G	197	230	Right-handed alpha
Helix 170	AS8	G	233	236	Right-handed 310
Helix 171	AS9	G	237	245	Right-handed alpha
Helix 172	AT1	G	246	260	Right-handed alpha
Helix 173	AT2	G	263	267	Right-handed 310
Helix 174	AT3	G	277	282	Right-handed alpha
Helix 175	AT4	G	282	305	Right-handed alpha
Helix 176	AT5	G	316	319	Right-handed 310
Helix 177	AT6	G	329	359	Right-handed alpha
Helix 178	AT7	G	359	364	Right-handed alpha
Helix 179	AT8	G	366	370	Right-handed 310
Helix 180	AT9	G	382	395	Right-handed alpha
Helix 181	AU1	G	396	398	Right-handed 310
Helix 182	AU2	G	417	451	Right-handed alpha
Helix 183	AU3	G	458	470	Right-handed alpha
Helix 184	AU4	G	478	492	Right-handed alpha
Helix 185	AU5	G	493	498	Right-handed 310
Helix 186	AU6	H	12	21	Right-handed alpha
Helix 187	AU7	H	29	49	Right-handed alpha
Helix 188	AU8	H	60	66	Right-handed 310
Helix 189	AU9	H	69	71	Right-handed 310
Helix 190	AV1	H	72	85	Right-handed alpha
Helix 191	AV2	H	93	109	Right-handed alpha
Helix 192	AV3	H	116	129	Right-handed alpha
Helix 193	AV4	H	148	157	Right-handed alpha
Helix 194	AV5	H	171	179	Right-handed alpha
Helix 195	AV6	H	188	195	Right-handed alpha
Helix 196	AV7	H	197	230	Right-handed alpha
Helix 197	AV8	H	233	236	Right-handed 310
Helix 198	AV9	H	237	243	Right-handed alpha
Helix 199	AW1	H	246	260	Right-handed alpha
Helix 200	AW2	H	263	267	Right-handed 310
Helix 201	AW3	H	277	282	Right-handed alpha
Helix 202	AW4	H	282	306	Right-handed alpha
Helix 203	AW5	H	329	358	Right-handed alpha
Helix 204	AW6	H	359	364	Right-handed alpha
Helix 205	AW7	H	366	370	Right-handed 310
Helix 206	AW8	H	381	395	Right-handed alpha
Helix 207	AW9	H	396	398	Right-handed 310
Helix 208	AX1	H	417	451	Right-handed alpha
Helix 209	AX2	H	456	470	Right-handed alpha
Helix 210	AX3	H	478	493	Right-handed alpha

There are 32 sheets in PDB entry 6S7J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	6	first strand
Strand 2	A	26	28	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	88	91	first strand
Strand 2	A	136	138	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	133	first strand
Strand 2	A	161	164	anti-parallel
Strand 3	A	167	170	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	315	first strand
Strand 2	A	320	322	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	6	first strand
Strand 2	B	27	28	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	88	91	first strand
Strand 2	B	136	138	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	133	first strand
Strand 2	B	161	164	anti-parallel
Strand 3	B	167	170	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	315	first strand
Strand 2	B	320	322	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	6	first strand
Strand 2	C	26	28	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	88	91	first strand
Strand 2	C	136	138	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	133	first strand
Strand 2	C	162	164	anti-parallel
Strand 3	C	167	169	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	315	first strand
Strand 2	C	320	322	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	6	first strand
Strand 2	D	25	28	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	88	91	first strand
Strand 2	D	136	138	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	132	133	first strand
Strand 2	D	161	163	anti-parallel
Strand 3	D	168	170	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	315	first strand
Strand 2	D	320	322	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	4	6	first strand
Strand 2	E	26	28	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	88	91	first strand
Strand 2	E	136	138	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	132	133	first strand
Strand 2	E	161	164	anti-parallel
Strand 3	E	167	170	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	313	314	first strand
Strand 2	E	321	322	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	6	first strand
Strand 2	F	26	28	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	88	91	first strand
Strand 2	F	136	138	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	132	133	first strand
Strand 2	F	161	164	anti-parallel
Strand 3	F	167	170	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	313	315	first strand
Strand 2	F	320	322	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	4	6	first strand
Strand 2	G	26	28	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	88	91	first strand
Strand 2	G	136	138	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	131	133	first strand
Strand 2	G	161	164	anti-parallel
Strand 3	G	167	170	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	313	315	first strand
Strand 2	G	320	322	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	6	first strand
Strand 2	H	26	28	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	88	91	first strand
Strand 2	H	136	138	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	131	133	first strand
Strand 2	H	161	164	anti-parallel
Strand 3	H	167	170	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	313	315	first strand
Strand 2	H	320	322	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6S7J

Analysis of interatomic Contacts of Structural Units in PDB entry:
6S7J