Analysis of interatomic Contacts of Structural Units in PDB entry:
6S7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6S7P entry

There is 1 chain in PDB entry 6S7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 42LYS 1251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 6S7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 69Right-handed alpha
Helix 2
AA2
A
69 74Right-handed alpha
Helix 3
AA3
A
74 79Right-handed alpha
Helix 4
AA4
A
107 160Right-handed alpha
Helix 5
AA5
A
161 168Right-handed alpha
Helix 6
AA6
A
172 188Right-handed alpha
Helix 7
AA7
A
189 213Right-handed alpha
Helix 8
AA8
A
213 222Right-handed alpha
Helix 9
AA9
A
223 262Right-handed alpha
Helix 10
AB1
A
262 269Right-handed alpha
Helix 11
AB2
A
271 325Right-handed alpha
Helix 12
AB3
A
329 350Right-handed alpha
Helix 13
AB4
A
350 373Right-handed alpha
Helix 14
AB5
A
434 443Right-handed alpha
Helix 15
AB6
A
461 463Right-handed 310
Helix 16
AB7
A
464 471Right-handed alpha
Helix 17
AB8
A
485 495Right-handed alpha
Helix 18
AB9
A
498 509Right-handed alpha
Helix 19
AC1
A
511 518Right-handed alpha
Helix 20
AC2
A
520 524Right-handed 310
Helix 21
AC3
A
527 531Right-handed 310
Helix 22
AC4
A
534 548Right-handed alpha
Helix 23
AC5
A
564 579Right-handed alpha
Helix 24
AC6
A
613 619Right-handed alpha
Helix 25
AC7
A
622 629Right-handed alpha
Helix 26
AC8
A
696 701Right-handed alpha
Helix 27
AC9
A
707 723Right-handed alpha
Helix 28
AD1
A
723 739Right-handed alpha
Helix 29
AD2
A
746 796Right-handed alpha
Helix 30
AD3
A
799 805Right-handed alpha
Helix 31
AD4
A
809 829Right-handed alpha
Helix 32
AD5
A
830 853Right-handed alpha
Helix 33
AD6
A
853 861Right-handed alpha
Helix 34
AD7
A
863 902Right-handed alpha
Helix 35
AD8
A
902 910Right-handed alpha
Helix 36
AD9
A
911 966Right-handed alpha
Helix 37
AE1
A
969 1013Right-handed alpha
Helix 38
AE2
A
1074 1084Right-handed alpha
Helix 39
AE3
A
1104 1111Right-handed alpha
Helix 40
AE4
A
1125 1132Right-handed alpha
Helix 41
AE5
A
1140 1151Right-handed alpha
Helix 42
AE6
A
1153 1160Right-handed alpha
Helix 43
AE7
A
1169 1173Right-handed 310
Helix 44
AE8
A
1176 1190Right-handed alpha
Helix 45
AE9
A
1206 1221Right-handed alpha
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There are 6 sheets in PDB entry 6S7P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 419first strand
Strand 2
A
394 397anti-parallel
Strand 3
A
452 455anti-parallel
Strand 4
A
458 459anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 401first strand
Strand 2
A
412 413anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
472 475first strand
Strand 2
A
553 557parallel
Strand 3
A
583 587parallel
Strand 4
A
424 428parallel
Strand 5
A
599 604parallel
Strand 6
A
607 612anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1056 1059first strand
Strand 2
A
1034 1037anti-parallel
Strand 3
A
1092 1095anti-parallel
Strand 4
A
1098 1099anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1040 1041first strand
Strand 2
A
1052 1053anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1112 1115first strand
Strand 2
A
1195 1199parallel
Strand 3
A
1225 1229parallel
Strand 4
A
1064 1068parallel
Strand 5
A
1241 1246parallel
Strand 6
A
1249 1250anti-parallel
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