Analysis of interatomic Contacts of Structural Units in PDB entry:
6S83

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6S83 entry

There are 8 chains in PDB entry 6S83 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	PHE 401
B	ALA 2	PHE 401
C	ALA 2	PHE 401
D	ALA 2	PHE 401
E	ALA 2	PHE 401
F	ALA 2	PHE 401
G	ALA 2	PHE 401
H	ALA 2	PHE 401

There are117 helices in PDB entry 6S83. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	18	Right-handed 310
Helix 2	AA2	A	30	55	Right-handed alpha
Helix 3	AA3	A	103	120	Right-handed alpha
Helix 4	AA4	A	124	128	Right-handed alpha
Helix 5	AA5	A	141	152	Right-handed alpha
Helix 6	AA6	A	170	184	Right-handed alpha
Helix 7	AA7	A	185	192	Right-handed alpha
Helix 8	AA8	A	221	223	Right-handed 310
Helix 9	AA9	A	225	248	Right-handed alpha
Helix 10	AB1	A	261	265	Right-handed 310
Helix 11	AB2	A	274	278	Right-handed 310
Helix 12	AB3	A	313	333	Right-handed alpha
Helix 13	AB4	A	367	385	Right-handed alpha
Helix 14	AB5	A	385	395	Right-handed alpha
Helix 15	AB6	B	14	18	Right-handed 310
Helix 16	AB7	B	30	55	Right-handed alpha
Helix 17	AB8	B	103	120	Right-handed alpha
Helix 18	AB9	B	124	128	Right-handed alpha
Helix 19	AC1	B	141	148	Right-handed alpha
Helix 20	AC2	B	170	184	Right-handed alpha
Helix 21	AC3	B	185	192	Right-handed alpha
Helix 22	AC4	B	221	223	Right-handed 310
Helix 23	AC5	B	225	248	Right-handed alpha
Helix 24	AC6	B	261	265	Right-handed 310
Helix 25	AC7	B	274	279	Right-handed 310
Helix 26	AC8	B	313	333	Right-handed alpha
Helix 27	AC9	B	367	370	Right-handed 310
Helix 28	AD1	B	371	385	Right-handed alpha
Helix 29	AD2	B	385	395	Right-handed alpha
Helix 30	AD3	C	14	18	Right-handed 310
Helix 31	AD4	C	30	55	Right-handed alpha
Helix 32	AD5	C	103	120	Right-handed alpha
Helix 33	AD6	C	124	128	Right-handed alpha
Helix 34	AD7	C	141	152	Right-handed alpha
Helix 35	AD8	C	170	184	Right-handed alpha
Helix 36	AD9	C	185	192	Right-handed alpha
Helix 37	AE1	C	221	223	Right-handed 310
Helix 38	AE2	C	225	248	Right-handed alpha
Helix 39	AE3	C	261	265	Right-handed 310
Helix 40	AE4	C	274	278	Right-handed 310
Helix 41	AE5	C	313	333	Right-handed alpha
Helix 42	AE6	C	367	385	Right-handed alpha
Helix 43	AE7	C	385	395	Right-handed alpha
Helix 44	AE8	D	14	18	Right-handed 310
Helix 45	AE9	D	30	55	Right-handed alpha
Helix 46	AF1	D	103	120	Right-handed alpha
Helix 47	AF2	D	124	128	Right-handed alpha
Helix 48	AF3	D	141	151	Right-handed alpha
Helix 49	AF4	D	170	184	Right-handed alpha
Helix 50	AF5	D	185	192	Right-handed alpha
Helix 51	AF6	D	221	223	Right-handed 310
Helix 52	AF7	D	225	248	Right-handed alpha
Helix 53	AF8	D	261	265	Right-handed 310
Helix 54	AF9	D	274	278	Right-handed 310
Helix 55	AG1	D	313	333	Right-handed alpha
Helix 56	AG2	D	367	370	Right-handed 310
Helix 57	AG3	D	371	385	Right-handed alpha
Helix 58	AG4	D	386	395	Right-handed alpha
Helix 59	AG5	E	14	18	Right-handed 310
Helix 60	AG6	E	30	55	Right-handed alpha
Helix 61	AG7	E	103	120	Right-handed alpha
Helix 62	AG8	E	124	128	Right-handed alpha
Helix 63	AG9	E	141	151	Right-handed alpha
Helix 64	AH1	E	170	184	Right-handed alpha
Helix 65	AH2	E	185	192	Right-handed alpha
Helix 66	AH3	E	221	223	Right-handed 310
Helix 67	AH4	E	225	248	Right-handed alpha
Helix 68	AH5	E	261	265	Right-handed 310
Helix 69	AH6	E	274	278	Right-handed 310
Helix 70	AH7	E	313	333	Right-handed alpha
Helix 71	AH8	E	367	385	Right-handed alpha
Helix 72	AH9	E	385	395	Right-handed alpha
Helix 73	AI1	F	14	18	Right-handed 310
Helix 74	AI2	F	30	55	Right-handed alpha
Helix 75	AI3	F	103	120	Right-handed alpha
Helix 76	AI4	F	124	128	Right-handed alpha
Helix 77	AI5	F	141	147	Right-handed alpha
Helix 78	AI6	F	170	184	Right-handed alpha
Helix 79	AI7	F	185	192	Right-handed alpha
Helix 80	AI8	F	221	223	Right-handed 310
Helix 81	AI9	F	225	248	Right-handed alpha
Helix 82	AJ1	F	261	265	Right-handed 310
Helix 83	AJ2	F	274	278	Right-handed 310
Helix 84	AJ3	F	313	333	Right-handed alpha
Helix 85	AJ4	F	367	370	Right-handed 310
Helix 86	AJ5	F	371	385	Right-handed alpha
Helix 87	AJ6	F	385	395	Right-handed alpha
Helix 88	AJ7	G	14	18	Right-handed 310
Helix 89	AJ8	G	30	55	Right-handed alpha
Helix 90	AJ9	G	103	120	Right-handed alpha
Helix 91	AK1	G	124	128	Right-handed alpha
Helix 92	AK2	G	141	151	Right-handed alpha
Helix 93	AK3	G	170	184	Right-handed alpha
Helix 94	AK4	G	185	192	Right-handed alpha
Helix 95	AK5	G	221	223	Right-handed 310
Helix 96	AK6	G	225	248	Right-handed alpha
Helix 97	AK7	G	261	265	Right-handed 310
Helix 98	AK8	G	274	278	Right-handed 310
Helix 99	AK9	G	313	333	Right-handed alpha
Helix 100	AL1	G	367	370	Right-handed 310
Helix 101	AL2	G	371	385	Right-handed alpha
Helix 102	AL3	G	385	395	Right-handed alpha
Helix 103	AL4	H	14	18	Right-handed 310
Helix 104	AL5	H	30	55	Right-handed alpha
Helix 105	AL6	H	103	120	Right-handed alpha
Helix 106	AL7	H	124	128	Right-handed alpha
Helix 107	AL8	H	141	151	Right-handed alpha
Helix 108	AL9	H	170	184	Right-handed alpha
Helix 109	AM1	H	185	192	Right-handed alpha
Helix 110	AM2	H	221	223	Right-handed 310
Helix 111	AM3	H	225	248	Right-handed alpha
Helix 112	AM4	H	261	265	Right-handed 310
Helix 113	AM5	H	274	279	Right-handed 310
Helix 114	AM6	H	313	333	Right-handed alpha
Helix 115	AM7	H	367	370	Right-handed 310
Helix 116	AM8	H	371	385	Right-handed alpha
Helix 117	AM9	H	385	395	Right-handed alpha

There are 48 sheets in PDB entry 6S83. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	9	first strand
Strand 2	A	355	362	parallel
Strand 3	A	335	343	anti-parallel
Strand 4	A	162	167	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	26	first strand
Strand 2	A	195	206	anti-parallel
Strand 3	A	209	219	anti-parallel
Strand 4	A	251	256	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	26	first strand
Strand 2	A	195	206	anti-parallel
Strand 3	A	209	219	anti-parallel
Strand 4	A	269	270	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	101	first strand
Strand 2	A	85	97	anti-parallel
Strand 3	A	136	140	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	133	first strand
Strand 2	A	85	97	parallel
Strand 3	A	60	68	anti-parallel
Strand 4	A	282	283	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	73	first strand
Strand 2	A	80	83	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	9	first strand
Strand 2	B	355	362	parallel
Strand 3	B	335	343	anti-parallel
Strand 4	B	162	167	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	26	first strand
Strand 2	B	195	206	anti-parallel
Strand 3	B	209	219	anti-parallel
Strand 4	B	251	256	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	26	first strand
Strand 2	B	195	206	anti-parallel
Strand 3	B	209	219	anti-parallel
Strand 4	B	269	270	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	133	first strand
Strand 2	B	85	93	parallel
Strand 3	B	60	68	anti-parallel
Strand 4	B	282	283	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	73	first strand
Strand 2	B	80	83	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	97	first strand
Strand 2	B	100	101	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	9	first strand
Strand 2	C	355	362	parallel
Strand 3	C	335	343	anti-parallel
Strand 4	C	162	167	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	26	first strand
Strand 2	C	195	206	anti-parallel
Strand 3	C	209	219	anti-parallel
Strand 4	C	251	256	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	26	first strand
Strand 2	C	195	206	anti-parallel
Strand 3	C	209	219	anti-parallel
Strand 4	C	269	270	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	101	first strand
Strand 2	C	85	97	anti-parallel
Strand 3	C	136	140	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	133	first strand
Strand 2	C	85	97	parallel
Strand 3	C	60	68	anti-parallel
Strand 4	C	282	283	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	71	73	first strand
Strand 2	C	80	83	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	9	first strand
Strand 2	D	355	362	parallel
Strand 3	D	335	343	anti-parallel
Strand 4	D	162	167	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	20	26	first strand
Strand 2	D	195	206	anti-parallel
Strand 3	D	209	219	anti-parallel
Strand 4	D	251	256	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	20	26	first strand
Strand 2	D	195	206	anti-parallel
Strand 3	D	209	219	anti-parallel
Strand 4	D	269	270	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	100	101	first strand
Strand 2	D	85	97	anti-parallel
Strand 3	D	136	140	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	129	133	first strand
Strand 2	D	85	97	parallel
Strand 3	D	60	68	anti-parallel
Strand 4	D	282	283	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	71	73	first strand
Strand 2	D	80	83	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	9	first strand
Strand 2	E	355	362	parallel
Strand 3	E	335	343	anti-parallel
Strand 4	E	162	167	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	20	26	first strand
Strand 2	E	195	206	anti-parallel
Strand 3	E	209	219	anti-parallel
Strand 4	E	251	256	parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	20	26	first strand
Strand 2	E	195	206	anti-parallel
Strand 3	E	209	219	anti-parallel
Strand 4	E	269	270	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	100	101	first strand
Strand 2	E	85	97	anti-parallel
Strand 3	E	136	140	parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	129	133	first strand
Strand 2	E	85	97	parallel
Strand 3	E	60	68	anti-parallel
Strand 4	E	282	283	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	71	73	first strand
Strand 2	E	80	83	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	9	first strand
Strand 2	F	355	362	parallel
Strand 3	F	335	343	anti-parallel
Strand 4	F	162	167	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	20	26	first strand
Strand 2	F	195	206	anti-parallel
Strand 3	F	209	219	anti-parallel
Strand 4	F	251	256	parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	20	26	first strand
Strand 2	F	195	206	anti-parallel
Strand 3	F	209	219	anti-parallel
Strand 4	F	269	270	parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	129	133	first strand
Strand 2	F	85	93	parallel
Strand 3	F	60	68	anti-parallel
Strand 4	F	282	283	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	73	first strand
Strand 2	F	80	83	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	96	97	first strand
Strand 2	F	100	101	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5	9	first strand
Strand 2	G	355	362	parallel
Strand 3	G	335	343	anti-parallel
Strand 4	G	162	167	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	20	26	first strand
Strand 2	G	195	206	anti-parallel
Strand 3	G	209	219	anti-parallel
Strand 4	G	251	256	parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	20	26	first strand
Strand 2	G	195	206	anti-parallel
Strand 3	G	209	219	anti-parallel
Strand 4	G	269	270	parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	100	101	first strand
Strand 2	G	85	97	anti-parallel
Strand 3	G	136	140	parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	129	133	first strand
Strand 2	G	85	97	parallel
Strand 3	G	60	68	anti-parallel
Strand 4	G	282	283	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	71	73	first strand
Strand 2	G	80	83	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	9	first strand
Strand 2	H	355	362	parallel
Strand 3	H	335	343	anti-parallel
Strand 4	H	162	167	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	20	26	first strand
Strand 2	H	195	206	anti-parallel
Strand 3	H	209	219	anti-parallel
Strand 4	H	251	256	parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	20	26	first strand
Strand 2	H	195	206	anti-parallel
Strand 3	H	209	219	anti-parallel
Strand 4	H	269	270	parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	100	101	first strand
Strand 2	H	85	97	anti-parallel
Strand 3	H	136	140	parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	129	133	first strand
Strand 2	H	85	97	parallel
Strand 3	H	60	68	anti-parallel
Strand 4	H	282	283	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	71	73	first strand
Strand 2	H	80	83	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6S83

Analysis of interatomic Contacts of Structural Units in PDB entry:
6S83