Analysis of interatomic Contacts of Structural Units in PDB entry:
6S8T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6S8T entry

There is 1 chain in PDB entry 6S8T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 733CYS 1200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6S8T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
747 765Right-handed alpha
Helix 2
AA2
A
768 772Right-handed 310
Helix 3
AA3
A
774 778Right-handed 310
Helix 4
AA4
A
791 795Right-handed 310
Helix 5
AA5
A
844 849Right-handed alpha
Helix 6
AA6
A
852 857Right-handed alpha
Helix 7
AA7
A
859 865Right-handed alpha
Helix 8
AA8
A
868 896Right-handed alpha
Helix 9
AA9
A
903 926Right-handed alpha
Helix 10
AB1
A
933 954Right-handed alpha
Helix 11
AB2
A
977 1001Right-handed alpha
Helix 12
AB3
A
1007 1011Right-handed 310
Helix 13
AB4
A
1019 1023Right-handed 310
Helix 14
AB5
A
1024 1052Right-handed alpha
Helix 15
AB6
A
1066 1105Right-handed alpha
Helix 16
AB7
A
1119 1135Right-handed alpha
Helix 17
AB8
A
1144 1147Right-handed 310
Helix 18
AB9
A
1148 1157Right-handed alpha
Helix 19
AC1
A
1196 1200Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6S8T.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
829 830first strand
Strand 2
A
842 843anti-parallel
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