Analysis of interatomic Contacts of Structural Units in PDB entry:
6S9K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6S9K entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 3 chains in PDB entry 6S9K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2THR 234
B
 ASP 137LEU 138
B
 LEU 140THR 158
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 6S9K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 17Right-handed alpha
Helix 2
AA2
A
19 32Right-handed alpha
Helix 3
AA3
A
38 70Right-handed alpha
Helix 4
AA4
A
77 107Right-handed alpha
Helix 5
AA5
A
116 138Right-handed alpha
Helix 6
AA6
A
139 165Right-handed alpha
Helix 7
AA7
A
169 186Right-handed alpha
Helix 8
AA8
A
189 207Right-handed alpha
Helix 9
AA9
A
208 211Right-handed 310
Helix 10
AB1
A
215 234Right-handed alpha
Helix 11
AB2
B
149 158Right-handed alpha
Back to top of page
There are no sheets in PDB entry 6S9K
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il