Analysis of interatomic Contacts of Structural Units in PDB entry:
6S9P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6S9P entry

There are 2 chains in PDB entry 6S9P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 5TRP 344
B
 SER 4LYS 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 6S9P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 12Right-handed alpha
Helix 2
AA2
A
13 15Right-handed 310
Helix 3
AA3
A
17 33Right-handed alpha
Helix 4
AA4
A
35 44Right-handed alpha
Helix 5
AA5
A
47 55Right-handed alpha
Helix 6
AA6
A
59 74Right-handed alpha
Helix 7
AA7
A
77 87Right-handed alpha
Helix 8
AA8
A
88 96Right-handed alpha
Helix 9
AA9
A
97 99Right-handed 310
Helix 10
AB1
A
101 116Right-handed alpha
Helix 11
AB2
A
119 129Right-handed alpha
Helix 12
AB3
A
131 139Right-handed alpha
Helix 13
AB4
A
143 158Right-handed alpha
Helix 14
AB5
A
161 171Right-handed alpha
Helix 15
AB6
A
173 180Right-handed alpha
Helix 16
AB7
A
181 183Right-handed 310
Helix 17
AB8
A
185 200Right-handed alpha
Helix 18
AB9
A
203 213Right-handed alpha
Helix 19
AC1
A
215 222Right-handed alpha
Helix 20
AC2
A
223 225Right-handed 310
Helix 21
AC3
A
227 242Right-handed alpha
Helix 22
AC4
A
245 255Right-handed alpha
Helix 23
AC5
A
257 265Right-handed alpha
Helix 24
AC6
A
269 284Right-handed alpha
Helix 25
AC7
A
287 297Right-handed alpha
Helix 26
AC8
A
298 306Right-handed alpha
Helix 27
AC9
A
307 309Right-handed 310
Helix 28
AD1
A
311 326Right-handed alpha
Helix 29
AD2
B
5 12Right-handed alpha
Helix 30
AD3
B
13 15Right-handed 310
Helix 31
AD4
B
17 33Right-handed alpha
Helix 32
AD5
B
35 45Right-handed alpha
Helix 33
AD6
B
47 54Right-handed alpha
Helix 34
AD7
B
55 57Right-handed 310
Helix 35
AD8
B
59 75Right-handed alpha
Helix 36
AD9
B
77 87Right-handed alpha
Helix 37
AE1
B
88 96Right-handed alpha
Helix 38
AE2
B
97 99Right-handed 310
Helix 39
AE3
B
101 116Right-handed alpha
Helix 40
AE4
B
119 129Right-handed alpha
Helix 41
AE5
B
131 139Right-handed alpha
Helix 42
AE6
B
143 158Right-handed alpha
Helix 43
AE7
B
161 171Right-handed alpha
Helix 44
AE8
B
172 180Right-handed alpha
Helix 45
AE9
B
181 183Right-handed 310
Helix 46
AF1
B
185 200Right-handed alpha
Helix 47
AF2
B
203 213Right-handed alpha
Helix 48
AF3
B
215 222Right-handed alpha
Helix 49
AF4
B
223 225Right-handed 310
Helix 50
AF5
B
227 242Right-handed alpha
Helix 51
AF6
B
245 255Right-handed alpha
Helix 52
AF7
B
257 264Right-handed alpha
Helix 53
AF8
B
265 267Right-handed 310
Helix 54
AF9
B
269 284Right-handed alpha
Helix 55
AG1
B
287 297Right-handed alpha
Helix 56
AG2
B
298 306Right-handed alpha
Helix 57
AG3
B
307 309Right-handed 310
Helix 58
AG4
B
311 326Right-handed alpha
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There are no sheets in PDB entry 6S9P
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il