Analysis of interatomic Contacts of Structural Units in PDB entry:
6S9V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6S9V entry

There are 2 chains in PDB entry 6S9V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 7VAL 502
B
 GLY 11LYS 133
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6S9V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 15Right-handed 310
Helix 2
AA2
A
33 45Right-handed alpha
Helix 3
AA3
A
62 66Right-handed 310
Helix 4
AA4
A
80 89Right-handed alpha
Helix 5
AA5
A
106 116Right-handed alpha
Helix 6
AA6
A
117 119Right-handed 310
Helix 7
AA7
A
121 125Right-handed 310
Helix 8
AA8
A
127 131Right-handed 310
Helix 9
AA9
A
138 143Right-handed alpha
Helix 10
AB1
A
186 203Right-handed alpha
Helix 11
AB2
A
212 216Right-handed 310
Helix 12
AB3
A
229 245Right-handed alpha
Helix 13
AB4
A
256 266Right-handed alpha
Helix 14
AB5
A
274 286Right-handed alpha
Helix 15
AB6
A
288 296Right-handed alpha
Helix 16
AB7
A
323 337Right-handed alpha
Helix 17
AB8
A
363 368Right-handed alpha
Helix 18
AB9
A
371 385Right-handed alpha
Helix 19
AC1
A
393 397Right-handed alpha
Helix 20
AC2
A
402 410Right-handed alpha
Helix 21
AC3
A
411 417Right-handed 310
Helix 22
AC4
A
421 429Right-handed alpha
Helix 23
AC5
A
431 447Right-handed alpha
Helix 24
AC6
A
448 452Right-handed 310
Helix 25
AC7
B
33 45Right-handed alpha
Helix 26
AC8
B
62 66Right-handed 310
Helix 27
AC9
B
80 88Right-handed alpha
Helix 28
AD1
B
106 116Right-handed alpha
Helix 29
AD2
B
117 119Right-handed 310
Helix 30
AD3
B
121 125Right-handed 310
Helix 31
AD4
B
127 131Right-handed 310
Helix 32
AD5
B
132 136Right-handed 310
Helix 33
AD6
B
138 143Right-handed alpha
Helix 34
AD7
B
186 203Right-handed alpha
Helix 35
AD8
B
212 216Right-handed 310
Helix 36
AD9
B
229 245Right-handed alpha
Helix 37
AE1
B
256 266Right-handed alpha
Helix 38
AE2
B
274 286Right-handed alpha
Helix 39
AE3
B
288 296Right-handed alpha
Helix 40
AE4
B
323 337Right-handed alpha
Helix 41
AE5
B
346 350Right-handed 310
Helix 42
AE6
B
363 368Right-handed alpha
Helix 43
AE7
B
371 385Right-handed alpha
Helix 44
AE8
B
393 397Right-handed alpha
Helix 45
AE9
B
402 410Right-handed alpha
Helix 46
AF1
B
411 417Right-handed 310
Helix 47
AF2
B
421 429Right-handed alpha
Helix 48
AF3
B
431 447Right-handed alpha
Helix 49
AF4
B
448 452Right-handed 310
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There are 10 sheets in PDB entry 6S9V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 25first strand
Strand 2
A
51 54parallel
Strand 3
A
92 97parallel
Strand 4
A
207 210parallel
Strand 5
A
248 251parallel
Strand 6
A
269 271parallel
Strand 7
A
302 304parallel
Strand 8
A
388 392parallel
Strand 9
A
22 25parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 103first strand
Strand 2
A
179 181anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 157first strand
Strand 2
A
164 168anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 313first strand
Strand 2
A
357 361anti-parallel
Strand 3
A
340 343anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
453 456first strand
Strand 2
A
463 470anti-parallel
Strand 3
A
473 480anti-parallel
Strand 4
A
486 491anti-parallel
Strand 5
A
497 501anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 25first strand
Strand 2
B
51 54parallel
Strand 3
B
92 97parallel
Strand 4
B
207 210parallel
Strand 5
B
248 251parallel
Strand 6
B
269 271parallel
Strand 7
B
302 304parallel
Strand 8
B
388 392parallel
Strand 9
B
22 25parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 103first strand
Strand 2
B
179 181anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 157first strand
Strand 2
B
164 168anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
312 313first strand
Strand 2
B
357 361anti-parallel
Strand 3
B
340 343anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
453 456first strand
Strand 2
B
463 470anti-parallel
Strand 3
B
473 480anti-parallel
Strand 4
B
485 491anti-parallel
Strand 5
B
497 501anti-parallel
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