Analysis of interatomic Contacts of Structural Units in PDB entry:
6SAO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SAO entry

There is 1 chain in PDB entry 6SAO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1SER 438
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6SAO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 7Right-handed alpha
Helix 2
AA2
A
15 20Right-handed alpha
Helix 3
AA3
A
39 45Right-handed alpha
Helix 4
AA4
A
46 53Right-handed alpha
Helix 5
AA5
A
83 87Right-handed 310
Helix 6
AA6
A
88 102Right-handed alpha
Helix 7
AA7
A
118 122Right-handed 310
Helix 8
AA8
A
130 134Right-handed 310
Helix 9
AA9
A
144 151Right-handed alpha
Helix 10
AB1
A
152 156Right-handed 310
Helix 11
AB2
A
164 183Right-handed alpha
Helix 12
AB3
A
191 195Right-handed 310
Helix 13
AB4
A
196 197Right-handed 310
Helix 14
AB5
A
198 208Right-handed alpha
Helix 15
AB6
A
219 224Right-handed alpha
Helix 16
AB7
A
225 229Right-handed 310
Helix 17
AB8
A
235 249Right-handed alpha
Helix 18
AB9
A
252 266Right-handed alpha
Helix 19
AC1
A
268 271Right-handed 310
Helix 20
AC2
A
283 288Right-handed alpha
Helix 21
AC3
A
290 304Right-handed alpha
Helix 22
AC4
A
313 317Right-handed 310
Helix 23
AC5
A
330 334Right-handed 310
Helix 24
AC6
A
339 350Right-handed alpha
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There are 3 sheets in PDB entry 6SAO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 233first strand
Strand 2
A
210 213parallel
Strand 3
A
186 189parallel
Strand 4
A
105 110parallel
Strand 5
A
57 60parallel
Strand 6
A
11 13parallel
Strand 7
A
307 311parallel
Strand 8
A
273 274parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 366first strand
Strand 2
A
370 375anti-parallel
Strand 3
A
378 383anti-parallel
Strand 4
A
433 437anti-parallel
Strand 5
A
406 409anti-parallel
Strand 6
A
415 417anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 396first strand
Strand 2
A
422 426anti-parallel
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