Analysis of interatomic Contacts of Structural Units in PDB entry:
6SAX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SAX entry

There are 2 chains in PDB entry 6SAX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 6HIS 312
A
 ASP 8HIS 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6SAX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
6 18Right-handed alpha
Helix 2
AA2
B
51 56Right-handed alpha
Helix 3
AA3
B
65 71Right-handed alpha
Helix 4
AA4
B
72 77Right-handed alpha
Helix 5
AA5
B
78 87Right-handed alpha
Helix 6
AA6
B
126 141Right-handed alpha
Helix 7
AA7
B
144 161Right-handed alpha
Helix 8
AA8
B
196 200Right-handed 310
Helix 9
AA9
B
201 211Right-handed alpha
Helix 10
AB1
B
249 260Right-handed alpha
Helix 11
AB2
B
290 309Right-handed alpha
Helix 12
AB3
A
9 18Right-handed alpha
Helix 13
AB4
A
50 59Right-handed alpha
Helix 14
AB5
A
65 69Right-handed 310
Helix 15
AB6
A
72 77Right-handed alpha
Helix 16
AB7
A
78 88Right-handed alpha
Helix 17
AB8
A
126 141Right-handed alpha
Helix 18
AB9
A
144 161Right-handed alpha
Helix 19
AC1
A
196 200Right-handed 310
Helix 20
AC2
A
201 208Right-handed alpha
Helix 21
AC3
A
249 259Right-handed alpha
Helix 22
AC4
A
290 312Right-handed alpha
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There are 4 sheets in PDB entry 6SAX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
224 228anti-parallel
Strand 3
B
43 48anti-parallel
Strand 4
B
33 38anti-parallel
Strand 5
B
112 118anti-parallel
Strand 6
B
103 109anti-parallel
Strand 7
B
95 98anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 195first strand
Strand 2
B
176 183anti-parallel
Strand 3
B
164 170anti-parallel
Strand 4
B
274 283anti-parallel
Strand 5
B
263 271anti-parallel
Strand 6
B
213 216anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
224 228anti-parallel
Strand 3
A
44 48anti-parallel
Strand 4
A
33 38anti-parallel
Strand 5
A
112 119anti-parallel
Strand 6
A
102 109anti-parallel
Strand 7
A
95 98anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 195first strand
Strand 2
A
176 183anti-parallel
Strand 3
A
164 170anti-parallel
Strand 4
A
274 283anti-parallel
Strand 5
A
263 271anti-parallel
Strand 6
A
213 216anti-parallel
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