Analysis of interatomic Contacts of Structural Units in PDB entry:
6SC4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SC4 entry

There are 5 chains in PDB entry 6SC4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 0GLU 176
B
 ARG 0ILE 177
C
 ARG 0ILE 177
D
 ARG 0ILE 177
E
 ARG 0ILE 177
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6SC4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
152 175Right-handed alpha
Helix 2
AA2
B
152 175Right-handed alpha
Helix 3
AA3
C
152 175Right-handed alpha
Helix 4
AA4
D
152 175Right-handed alpha
Helix 5
AA5
E
152 177Right-handed alpha
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There are 20 sheets in PDB entry 6SC4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
23 30parallel
Strand 3
A
41 51parallel
Strand 4
A
62 64parallel
Strand 5
A
92 94parallel
Strand 6
A
109 110parallel
Strand 7
A
127 128parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
23 30parallel
Strand 3
A
41 51parallel
Strand 4
A
79 81parallel
Strand 5
A
97 98parallel
Strand 6
A
115 116parallel
Strand 7
A
133 134parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 18first strand
Strand 2
A
35 36parallel
Strand 3
A
56 57parallel
Strand 4
A
86 87parallel
Strand 5
A
103 104parallel
Strand 6
A
121 122parallel
Strand 7
A
138 141parallel
Strand 8
A
146 150anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 69first strand
Strand 2
A
74 77anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1 3first strand
Strand 2
B
23 30parallel
Strand 3
B
41 51parallel
Strand 4
B
62 64parallel
Strand 5
B
92 94parallel
Strand 6
B
109 110parallel
Strand 7
B
127 128parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 12first strand
Strand 2
B
23 30parallel
Strand 3
B
41 51parallel
Strand 4
B
79 81parallel
Strand 5
B
97 98parallel
Strand 6
B
115 116parallel
Strand 7
B
133 134parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 18first strand
Strand 2
B
35 36parallel
Strand 3
B
56 57parallel
Strand 4
B
86 87parallel
Strand 5
B
103 104parallel
Strand 6
B
121 122parallel
Strand 7
B
138 141parallel
Strand 8
B
146 150anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
75 77anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1 3first strand
Strand 2
C
23 30parallel
Strand 3
C
41 51parallel
Strand 4
C
62 64parallel
Strand 5
C
92 94parallel
Strand 6
C
109 110parallel
Strand 7
C
127 128parallel
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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
23 30parallel
Strand 3
C
41 51parallel
Strand 4
C
79 81parallel
Strand 5
C
97 98parallel
Strand 6
C
115 116parallel
Strand 7
C
133 134parallel
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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 18first strand
Strand 2
C
35 36parallel
Strand 3
C
56 57parallel
Strand 4
C
86 87parallel
Strand 5
C
103 104parallel
Strand 6
C
121 122parallel
Strand 7
C
138 141parallel
Strand 8
C
146 150anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
66 69first strand
Strand 2
C
74 77anti-parallel
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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1 3first strand
Strand 2
D
23 30parallel
Strand 3
D
41 51parallel
Strand 4
D
62 64parallel
Strand 5
D
92 94parallel
Strand 6
D
109 110parallel
Strand 7
D
127 128parallel
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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 12first strand
Strand 2
D
23 30parallel
Strand 3
D
41 51parallel
Strand 4
D
79 81parallel
Strand 5
D
97 98parallel
Strand 6
D
115 116parallel
Strand 7
D
133 134parallel
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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
17 18first strand
Strand 2
D
35 36parallel
Strand 3
D
56 57parallel
Strand 4
D
86 87parallel
Strand 5
D
103 104parallel
Strand 6
D
121 122parallel
Strand 7
D
138 141parallel
Strand 8
D
146 150anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
66 68first strand
Strand 2
D
75 77anti-parallel
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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1 3first strand
Strand 2
E
23 30parallel
Strand 3
E
41 51parallel
Strand 4
E
62 64parallel
Strand 5
E
92 94parallel
Strand 6
E
109 110parallel
Strand 7
E
127 128parallel
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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
11 12first strand
Strand 2
E
23 30parallel
Strand 3
E
41 51parallel
Strand 4
E
79 81parallel
Strand 5
E
97 98parallel
Strand 6
E
115 116parallel
Strand 7
E
133 134parallel
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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
17 18first strand
Strand 2
E
35 36parallel
Strand 3
E
56 57parallel
Strand 4
E
86 87parallel
Strand 5
E
103 104parallel
Strand 6
E
121 122parallel
Strand 7
E
138 141parallel
Strand 8
E
146 150anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
66 69first strand
Strand 2
E
74 77anti-parallel
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