Analysis of interatomic Contacts of Structural Units in PDB entry:
6SCM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SCM entry

There is 1 chain in PDB entry 6SCM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 564SER 1043
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6SCM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
575 579Right-handed 310
Helix 2
AA2
A
605 614Right-handed alpha
Helix 3
AA3
A
620 631Right-handed alpha
Helix 4
AA4
A
632 634Right-handed 310
Helix 5
AA5
A
636 649Right-handed alpha
Helix 6
AA6
A
656 665Right-handed alpha
Helix 7
AA7
A
671 681Right-handed alpha
Helix 8
AA8
A
681 700Right-handed alpha
Helix 9
AA9
A
701 707Right-handed alpha
Helix 10
AB1
A
707 720Right-handed alpha
Helix 11
AB2
A
723 743Right-handed alpha
Helix 12
AB3
A
770 774Right-handed 310
Helix 13
AB4
A
780 798Right-handed alpha
Helix 14
AB5
A
800 805Right-handed 310
Helix 15
AB6
A
818 841Right-handed alpha
Helix 16
AB7
A
844 865Right-handed alpha
Helix 17
AB8
A
867 879Right-handed alpha
Helix 18
AB9
A
880 885Right-handed alpha
Helix 19
AC1
A
886 892Right-handed alpha
Helix 20
AC2
A
894 907Right-handed alpha
Helix 21
AC3
A
908 920Right-handed alpha
Helix 22
AC4
A
930 942Right-handed alpha
Helix 23
AC5
A
958 973Right-handed alpha
Helix 24
AC6
A
984 993Right-handed alpha
Helix 25
AC7
A
1001 1017Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6SCM.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
586 588first strand
Strand 2
A
601 604anti-parallel
Strand 3
A
953 957anti-parallel
Strand 4
A
947 950anti-parallel
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