Analysis of interatomic Contacts of Structural Units in PDB entry:
6SCY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SCY entry

There are 2 chains in PDB entry 6SCY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 308
B
 MET 1PHE 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6SCY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 42Right-handed alpha
Helix 2
AA2
A
59 76Right-handed alpha
Helix 3
AA3
A
94 109Right-handed alpha
Helix 4
AA4
A
118 121Right-handed 310
Helix 5
AA5
A
140 160Right-handed alpha
Helix 6
AA6
A
170 185Right-handed alpha
Helix 7
AA7
A
187 193Right-handed alpha
Helix 8
AA8
A
213 224Right-handed alpha
Helix 9
AA9
A
238 255Right-handed alpha
Helix 10
AB1
A
257 271Right-handed alpha
Helix 11
AB2
B
25 42Right-handed alpha
Helix 12
AB3
B
59 75Right-handed alpha
Helix 13
AB4
B
94 109Right-handed alpha
Helix 14
AB5
B
117 121Right-handed alpha
Helix 15
AB6
B
140 160Right-handed alpha
Helix 16
AB7
B
170 185Right-handed alpha
Helix 17
AB8
B
187 195Right-handed alpha
Helix 18
AB9
B
213 224Right-handed alpha
Helix 19
AC1
B
238 253Right-handed alpha
Helix 20
AC2
B
257 272Right-handed alpha
Helix 21
AC3
B
296 302Right-handed alpha
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There are 4 sheets in PDB entry 6SCY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
22 24anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 116first strand
Strand 2
A
80 87parallel
Strand 3
A
51 55parallel
Strand 4
A
164 167parallel
Strand 5
A
204 206parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 17first strand
Strand 2
B
22 24anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 116first strand
Strand 2
B
81 87parallel
Strand 3
B
52 55parallel
Strand 4
B
164 167parallel
Strand 5
B
204 206parallel
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