Analysis of interatomic Contacts of Structural Units in PDB entry:
6SCZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SCZ entry

There are 2 chains in PDB entry 6SCZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 11ALA 383
B
 LEU 12PHE 297
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6SCZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 35Right-handed alpha
Helix 2
AA2
A
43 49Right-handed alpha
Helix 3
AA3
A
51 62Right-handed alpha
Helix 4
AA4
A
71 81Right-handed alpha
Helix 5
AA5
A
98 104Right-handed alpha
Helix 6
AA6
A
112 127Right-handed alpha
Helix 7
AA7
A
149 163Right-handed alpha
Helix 8
AA8
A
183 203Right-handed alpha
Helix 9
AA9
A
214 221Right-handed alpha
Helix 10
AB1
A
222 225Right-handed 310
Helix 11
AB2
A
241 245Right-handed 310
Helix 12
AB3
A
272 276Right-handed 310
Helix 13
AB4
A
291 295Right-handed 310
Helix 14
AB5
A
297 301Right-handed 310
Helix 15
AB6
A
353 362Right-handed alpha
Helix 16
AB7
A
364 370Right-handed alpha
Helix 17
AB8
B
20 35Right-handed alpha
Helix 18
AB9
B
43 49Right-handed alpha
Helix 19
AC1
B
51 62Right-handed alpha
Helix 20
AC2
B
71 81Right-handed alpha
Helix 21
AC3
B
98 104Right-handed alpha
Helix 22
AC4
B
112 127Right-handed alpha
Helix 23
AC5
B
146 148Right-handed 310
Helix 24
AC6
B
149 163Right-handed alpha
Helix 25
AC7
B
183 203Right-handed alpha
Helix 26
AC8
B
214 221Right-handed alpha
Helix 27
AC9
B
222 225Right-handed 310
Helix 28
AD1
B
232 237Right-handed 310
Helix 29
AD2
B
241 245Right-handed 310
Helix 30
AD3
B
272 276Right-handed 310
Helix 31
AD4
B
291 295Right-handed 310
Helix 32
AD5
B
297 301Right-handed 310
Helix 33
AD6
B
353 362Right-handed alpha
Helix 34
AD7
B
364 370Right-handed alpha
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There are 6 sheets in PDB entry 6SCZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 265first strand
Strand 2
A
283 288anti-parallel
Strand 3
A
324 329anti-parallel
Strand 4
A
311 316anti-parallel
Strand 5
A
305 308anti-parallel
Strand 6
A
340 344anti-parallel
Strand 7
A
253 258anti-parallel
Strand 8
A
14 19anti-parallel
Strand 9
A
376 381parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 42first strand
Strand 2
A
66 69parallel
Strand 3
A
87 89parallel
Strand 4
A
107 110parallel
Strand 5
A
130 135parallel
Strand 6
A
166 172parallel
Strand 7
A
209 213parallel
Strand 8
A
228 229parallel
Strand 9
A
38 42parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 271first strand
Strand 2
A
277 278anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 265first strand
Strand 2
B
283 288anti-parallel
Strand 3
B
324 329anti-parallel
Strand 4
B
311 316anti-parallel
Strand 5
B
305 308anti-parallel
Strand 6
B
340 344anti-parallel
Strand 7
B
253 258anti-parallel
Strand 8
B
14 19anti-parallel
Strand 9
B
376 381parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 211first strand
Strand 2
B
166 172parallel
Strand 3
B
130 135parallel
Strand 4
B
107 110parallel
Strand 5
B
87 89parallel
Strand 6
B
66 69parallel
Strand 7
B
38 42parallel
Strand 8
B
228 229parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 271first strand
Strand 2
B
277 278anti-parallel
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