Analysis of interatomic Contacts of Structural Units in PDB entry:
6SFC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6SFC entry

There are 2 chains in PDB entry 6SFC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 82	ARG 439
B	SER 81	ARG 439

There are 2 helices in PDB entry 6SFC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	267	280	Right-handed alpha
Helix 2	AA2	B	267	278	Right-handed alpha

There are 14 sheets in PDB entry 6SFC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	89	first strand
Strand 2	A	433	438	anti-parallel
Strand 3	A	424	429	anti-parallel
Strand 4	A	413	418	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	101	first strand
Strand 2	A	111	117	anti-parallel
Strand 3	A	120	126	anti-parallel
Strand 4	A	132	139	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	154	first strand
Strand 2	A	161	167	anti-parallel
Strand 3	A	172	176	anti-parallel
Strand 4	A	181	186	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	193	198	first strand
Strand 2	A	205	210	anti-parallel
Strand 3	A	215	219	anti-parallel
Strand 4	A	224	229	anti-parallel
Strand 5	A	292	294	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	244	first strand
Strand 2	A	250	255	anti-parallel
Strand 3	A	260	264	anti-parallel
Strand 4	A	299	301	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	315	first strand
Strand 2	A	318	322	anti-parallel
Strand 3	A	327	333	anti-parallel
Strand 4	A	350	357	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	370	first strand
Strand 2	A	376	380	anti-parallel
Strand 3	A	386	390	anti-parallel
Strand 4	A	402	404	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	89	first strand
Strand 2	B	433	438	anti-parallel
Strand 3	B	424	429	anti-parallel
Strand 4	B	413	418	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	101	first strand
Strand 2	B	111	117	anti-parallel
Strand 3	B	120	126	anti-parallel
Strand 4	B	132	139	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	154	first strand
Strand 2	B	161	167	anti-parallel
Strand 3	B	172	176	anti-parallel
Strand 4	B	181	186	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	193	198	first strand
Strand 2	B	205	210	anti-parallel
Strand 3	B	215	219	anti-parallel
Strand 4	B	224	229	anti-parallel
Strand 5	B	292	294	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	239	244	first strand
Strand 2	B	250	255	anti-parallel
Strand 3	B	260	264	anti-parallel
Strand 4	B	299	301	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	315	first strand
Strand 2	B	318	322	anti-parallel
Strand 3	B	327	333	anti-parallel
Strand 4	B	350	357	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	370	first strand
Strand 2	B	376	380	anti-parallel
Strand 3	B	386	390	anti-parallel
Strand 4	B	402	404	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6SFC

Analysis of interatomic Contacts of Structural Units in PDB entry:
6SFC