Analysis of interatomic Contacts of Structural Units in PDB entry:
6SFX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6SFX entry

There are 14 chains in PDB entry 6SFX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 17	ASP 194
B	ILE 17	ASP 194
C	ILE 17	ASP 194
D	ILE 17	ASP 194
E	ILE 17	ASP 194
F	ILE 17	ASP 194
G	ILE 17	ASP 194
H	MET 1	GLY 198
I	MET 1	GLY 198
J	MET 1	GLY 198
K	MET 1	GLY 198
L	MET 1	GLY 198
M	MET 1	GLY 198
N	MET 1	GLY 198

There are106 helices in PDB entry 6SFX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	29	Right-handed alpha
Helix 2	AA2	A	38	56	Right-handed alpha
Helix 3	AA3	A	70	84	Right-handed alpha
Helix 4	AA4	A	97	105	Right-handed alpha
Helix 5	AA5	A	106	107	Right-handed 310
Helix 6	AA6	A	108	110	Right-handed 310
Helix 7	AA7	A	133	159	Right-handed alpha
Helix 8	AA8	A	161	169	Right-handed alpha
Helix 9	AA9	A	176	183	Right-handed alpha
Helix 10	AB1	B	18	28	Right-handed alpha
Helix 11	AB2	B	38	56	Right-handed alpha
Helix 12	AB3	B	70	84	Right-handed alpha
Helix 13	AB4	B	99	105	Right-handed alpha
Helix 14	AB5	B	132	159	Right-handed alpha
Helix 15	AB6	B	161	170	Right-handed alpha
Helix 16	AB7	B	177	183	Right-handed alpha
Helix 17	AB8	C	18	22	Right-handed alpha
Helix 18	AB9	C	23	28	Right-handed alpha
Helix 19	AC1	C	38	56	Right-handed alpha
Helix 20	AC2	C	71	84	Right-handed alpha
Helix 21	AC3	C	97	106	Right-handed alpha
Helix 22	AC4	C	133	159	Right-handed alpha
Helix 23	AC5	C	161	169	Right-handed alpha
Helix 24	AC6	C	177	183	Right-handed alpha
Helix 25	AC7	D	19	29	Right-handed alpha
Helix 26	AC8	D	40	56	Right-handed alpha
Helix 27	AC9	D	70	84	Right-handed alpha
Helix 28	AD1	D	101	107	Right-handed alpha
Helix 29	AD2	D	133	159	Right-handed alpha
Helix 30	AD3	D	161	170	Right-handed alpha
Helix 31	AD4	D	177	184	Right-handed alpha
Helix 32	AD5	E	17	22	Right-handed 310
Helix 33	AD6	E	23	28	Right-handed alpha
Helix 34	AD7	E	38	56	Right-handed alpha
Helix 35	AD8	E	72	84	Right-handed alpha
Helix 36	AD9	E	97	107	Right-handed alpha
Helix 37	AE1	E	133	159	Right-handed alpha
Helix 38	AE2	E	161	170	Right-handed alpha
Helix 39	AE3	E	176	184	Right-handed alpha
Helix 40	AE4	F	22	29	Right-handed alpha
Helix 41	AE5	F	38	56	Right-handed alpha
Helix 42	AE6	F	70	84	Right-handed alpha
Helix 43	AE7	F	100	105	Right-handed alpha
Helix 44	AE8	F	108	110	Right-handed 310
Helix 45	AE9	F	132	158	Right-handed alpha
Helix 46	AF1	F	161	169	Right-handed alpha
Helix 47	AF2	F	177	184	Right-handed alpha
Helix 48	AF3	G	18	27	Right-handed alpha
Helix 49	AF4	G	38	56	Right-handed alpha
Helix 50	AF5	G	70	84	Right-handed alpha
Helix 51	AF6	G	97	106	Right-handed alpha
Helix 52	AF7	G	133	159	Right-handed alpha
Helix 53	AF8	G	161	169	Right-handed alpha
Helix 54	AF9	G	177	184	Right-handed alpha
Helix 55	AG1	H	20	27	Right-handed alpha
Helix 56	AG2	H	37	55	Right-handed alpha
Helix 57	AG3	H	70	84	Right-handed alpha
Helix 58	AG4	H	99	106	Right-handed alpha
Helix 59	AG5	H	133	159	Right-handed alpha
Helix 60	AG6	H	161	169	Right-handed alpha
Helix 61	AG7	H	177	184	Right-handed alpha
Helix 62	AG8	I	8	14	Right-handed alpha
Helix 63	AG9	I	19	27	Right-handed alpha
Helix 64	AH1	I	37	55	Right-handed alpha
Helix 65	AH2	I	70	84	Right-handed alpha
Helix 66	AH3	I	99	105	Right-handed alpha
Helix 67	AH4	I	133	157	Right-handed alpha
Helix 68	AH5	I	161	169	Right-handed alpha
Helix 69	AH6	I	177	183	Right-handed alpha
Helix 70	AH7	J	19	27	Right-handed alpha
Helix 71	AH8	J	39	55	Right-handed alpha
Helix 72	AH9	J	70	82	Right-handed alpha
Helix 73	AI1	J	99	105	Right-handed alpha
Helix 74	AI2	J	132	159	Right-handed alpha
Helix 75	AI3	J	161	170	Right-handed alpha
Helix 76	AI4	J	177	184	Right-handed alpha
Helix 77	AI5	K	20	27	Right-handed alpha
Helix 78	AI6	K	37	55	Right-handed alpha
Helix 79	AI7	K	70	84	Right-handed alpha
Helix 80	AI8	K	99	107	Right-handed alpha
Helix 81	AI9	K	132	159	Right-handed alpha
Helix 82	AJ1	K	161	171	Right-handed alpha
Helix 83	AJ2	K	177	184	Right-handed alpha
Helix 84	AJ3	K	191	196	Right-handed alpha
Helix 85	AJ4	L	21	26	Right-handed alpha
Helix 86	AJ5	L	37	55	Right-handed alpha
Helix 87	AJ6	L	70	84	Right-handed alpha
Helix 88	AJ7	L	99	107	Right-handed alpha
Helix 89	AJ8	L	132	158	Right-handed alpha
Helix 90	AJ9	L	161	171	Right-handed alpha
Helix 91	AK1	L	177	184	Right-handed alpha
Helix 92	AK2	M	19	27	Right-handed alpha
Helix 93	AK3	M	37	53	Right-handed alpha
Helix 94	AK4	M	70	84	Right-handed alpha
Helix 95	AK5	M	97	107	Right-handed alpha
Helix 96	AK6	M	133	159	Right-handed alpha
Helix 97	AK7	M	161	169	Right-handed alpha
Helix 98	AK8	M	176	184	Right-handed alpha
Helix 99	AK9	N	8	11	Right-handed 310
Helix 100	AL1	N	20	27	Right-handed alpha
Helix 101	AL2	N	37	54	Right-handed alpha
Helix 102	AL3	N	70	84	Right-handed alpha
Helix 103	AL4	N	99	106	Right-handed alpha
Helix 104	AL5	N	133	159	Right-handed alpha
Helix 105	AL6	N	162	169	Right-handed alpha
Helix 106	AL7	N	177	184	Right-handed alpha

There are 38 sheets in PDB entry 6SFX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	34	first strand
Strand 2	A	60	65	parallel
Strand 3	A	88	92	parallel
Strand 4	A	112	114	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	121	first strand
Strand 2	A	174	175	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	127	first strand
Strand 2	H	131	132	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	130	132	first strand
Strand 2	H	126	128	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	37	first strand
Strand 2	B	60	69	parallel
Strand 3	B	88	92	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	95	97	first strand
Strand 2	B	119	122	parallel
Strand 3	B	173	176	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	113	114	first strand
Strand 2	B	188	189	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	129	first strand
Strand 2	N	129	132	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	34	first strand
Strand 2	C	60	65	parallel
Strand 3	C	88	92	parallel
Strand 4	C	112	114	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	95	96	first strand
Strand 2	C	119	122	parallel
Strand 3	C	173	176	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	132	first strand
Strand 2	M	126	132	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	37	first strand
Strand 2	D	60	69	parallel
Strand 3	D	88	92	parallel
Strand 4	D	112	114	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	95	96	first strand
Strand 2	D	119	122	parallel
Strand 3	D	173	176	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	129	132	first strand
Strand 2	L	126	129	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	30	34	first strand
Strand 2	E	60	65	parallel
Strand 3	E	88	92	parallel
Strand 4	E	112	114	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	95	96	first strand
Strand 2	E	119	122	parallel
Strand 3	E	173	175	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	129	132	first strand
Strand 2	K	126	129	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	30	34	first strand
Strand 2	F	60	65	parallel
Strand 3	F	88	92	parallel
Strand 4	F	112	114	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	119	121	first strand
Strand 2	F	174	176	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	127	131	first strand
Strand 2	J	127	131	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	30	34	first strand
Strand 2	G	61	65	parallel
Strand 3	G	90	92	parallel
Strand 4	G	112	114	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	95	96	first strand
Strand 2	G	119	122	parallel
Strand 3	G	173	176	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	127	132	first strand
Strand 2	I	126	131	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6	7	first strand
Strand 2	H	18	19	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	29	32	first strand
Strand 2	H	60	64	parallel
Strand 3	H	88	92	parallel
Strand 4	H	112	114	parallel
Strand 5	H	188	189	parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	95	96	first strand
Strand 2	H	119	123	parallel
Strand 3	H	172	176	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	29	32	first strand
Strand 2	I	61	64	parallel
Strand 3	I	89	92	parallel
Strand 4	I	112	114	parallel
Strand 5	I	188	189	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	95	96	first strand
Strand 2	I	119	120	parallel
Strand 3	I	175	176	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	29	32	first strand
Strand 2	J	61	66	parallel
Strand 3	J	91	97	parallel
Strand 4	J	113	114	parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	29	32	first strand
Strand 2	J	61	66	parallel
Strand 3	J	91	97	parallel
Strand 4	J	119	122	parallel
Strand 5	J	173	176	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	29	32	first strand
Strand 2	K	60	64	parallel
Strand 3	K	88	92	parallel
Strand 4	K	112	114	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	119	122	first strand
Strand 2	K	173	176	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	29	32	first strand
Strand 2	L	60	64	parallel
Strand 3	L	88	92	parallel
Strand 4	L	112	114	parallel
Strand 5	L	188	189	parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	95	96	first strand
Strand 2	L	119	122	parallel
Strand 3	L	173	176	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	29	32	first strand
Strand 2	M	60	64	parallel
Strand 3	M	88	92	parallel
Strand 4	M	112	114	parallel
Strand 5	M	188	189	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	6	7	first strand
Strand 2	N	18	19	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	29	32	first strand
Strand 2	N	61	64	parallel
Strand 3	N	89	92	parallel
Strand 4	N	112	114	parallel
Strand 5	N	188	189	parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	95	96	first strand
Strand 2	N	119	122	parallel
Strand 3	N	173	176	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6SFX

Analysis of interatomic Contacts of Structural Units in PDB entry:
6SFX