Analysis of interatomic Contacts of Structural Units in PDB entry:
6SGX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6SGX entry

There are 5 chains in PDB entry 6SGX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 11	SER 89
B	PRO 8	LEU 471
C	PRO 8	VAL 472
F	SER 2	SER 402
G	MET 1	LEU 285

There are 56 helices in PDB entry 6SGX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	49	Right-handed alpha
Helix 2	AA2	A	62	87	Right-handed alpha
Helix 3	AA3	B	38	46	Right-handed alpha
Helix 4	AA4	B	111	119	Right-handed alpha
Helix 5	AA5	B	127	156	Right-handed alpha
Helix 6	AA6	B	161	180	Right-handed alpha
Helix 7	AA7	B	187	196	Right-handed alpha
Helix 8	AA8	B	198	205	Right-handed alpha
Helix 9	AA9	B	214	234	Right-handed alpha
Helix 10	AB1	B	241	263	Right-handed alpha
Helix 11	AB2	B	269	285	Right-handed alpha
Helix 12	AB3	B	285	294	Right-handed alpha
Helix 13	AB4	B	319	351	Right-handed alpha
Helix 14	AB5	B	356	373	Right-handed alpha
Helix 15	AB6	B	374	377	Right-handed 310
Helix 16	AB7	B	379	404	Right-handed alpha
Helix 17	AB8	B	409	430	Right-handed alpha
Helix 18	AB9	B	442	466	Right-handed alpha
Helix 19	AC1	C	34	47	Right-handed alpha
Helix 20	AC2	C	82	87	Right-handed alpha
Helix 21	AC3	C	115	124	Right-handed alpha
Helix 22	AC4	C	129	157	Right-handed alpha
Helix 23	AC5	C	161	181	Right-handed alpha
Helix 24	AC6	C	187	196	Right-handed alpha
Helix 25	AC7	C	196	204	Right-handed alpha
Helix 26	AC8	C	216	231	Right-handed alpha
Helix 27	AC9	C	241	263	Right-handed alpha
Helix 28	AD1	C	267	285	Right-handed alpha
Helix 29	AD2	C	286	294	Right-handed alpha
Helix 30	AD3	C	313	318	Right-handed alpha
Helix 31	AD4	C	319	345	Right-handed alpha
Helix 32	AD5	C	345	350	Right-handed alpha
Helix 33	AD6	C	358	373	Right-handed alpha
Helix 34	AD7	C	374	376	Right-handed 310
Helix 35	AD8	C	379	404	Right-handed alpha
Helix 36	AD9	C	408	430	Right-handed alpha
Helix 37	AE1	C	442	467	Right-handed alpha
Helix 38	AE2	F	38	43	Right-handed alpha
Helix 39	AE3	F	93	130	Right-handed alpha
Helix 40	AE4	F	134	138	Right-handed 310
Helix 41	AE5	F	183	197	Right-handed alpha
Helix 42	AE6	F	210	212	Right-handed 310
Helix 43	AE7	F	224	239	Right-handed alpha
Helix 44	AE8	F	258	263	Right-handed 310
Helix 45	AE9	F	286	293	Right-handed alpha
Helix 46	AF1	F	386	396	Right-handed alpha
Helix 47	AF2	G	2	17	Right-handed alpha
Helix 48	AF3	G	27	37	Right-handed alpha
Helix 49	AF4	G	49	64	Right-handed alpha
Helix 50	AF5	G	86	88	Right-handed 310
Helix 51	AF6	G	89	95	Right-handed alpha
Helix 52	AF7	G	96	98	Right-handed 310
Helix 53	AF8	G	131	136	Right-handed alpha
Helix 54	AF9	G	143	162	Right-handed alpha
Helix 55	AG1	G	206	212	Right-handed alpha
Helix 56	AG2	G	265	269	Right-handed alpha

There are 7 sheets in PDB entry 6SGX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	71	first strand
Strand 2	B	93	98	anti-parallel
Strand 3	B	9	15	parallel
Strand 4	B	22	30	anti-parallel
Strand 5	C	109	112	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	9	15	anti-parallel
Strand 3	C	93	98	parallel
Strand 4	C	67	71	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	23	24	first strand
Strand 2	F	172	173	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	202	208	first strand
Strand 2	F	157	164	anti-parallel
Strand 3	F	381	382	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	339	343	first strand
Strand 2	F	214	218	parallel
Strand 3	F	359	362	parallel
Strand 4	F	367	369	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	282	283	first strand
Strand 2	F	244	249	parallel
Strand 3	F	313	318	parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	166	169	first strand
Strand 2	G	76	82	anti-parallel
Strand 3	G	119	126	anti-parallel
Strand 4	G	106	112	anti-parallel
Strand 5	G	220	227	anti-parallel
Strand 6	G	234	241	anti-parallel
Strand 7	G	195	199	anti-parallel
Strand 8	G	256	257	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6SGX

Analysis of interatomic Contacts of Structural Units in PDB entry:
6SGX