Analysis of interatomic Contacts of Structural Units in PDB entry:
6SHL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SHL entry

There are 4 chains in PDB entry 6SHL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 603THR 869
B
 PRO 2GLN 232
C
 SER 326GLN 586
D
 GLU 274TYR 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6SHL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
622 626Right-handed 310
Helix 2
AA2
A
627 631Right-handed 310
Helix 3
AA3
A
641 646Right-handed alpha
Helix 4
AA4
A
704 710Right-handed alpha
Helix 5
AA5
A
711 713Right-handed 310
Helix 6
AA6
A
763 771Right-handed alpha
Helix 7
AA7
A
773 777Right-handed 310
Helix 8
AA8
B
81 87Right-handed alpha
Helix 9
AA9
B
142 146Right-handed 310
Helix 10
AB1
C
380 386Right-handed alpha
Helix 11
AB2
C
430 435Right-handed alpha
Helix 12
AB3
C
511 516Right-handed alpha
Helix 13
AB4
D
289 293Right-handed 310
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There are 13 sheets in PDB entry 6SHL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
650 655first strand
Strand 2
A
839 845anti-parallel
Strand 3
A
720 724anti-parallel
Strand 4
A
794 796anti-parallel
Strand 5
C
355 356parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
752 757first strand
Strand 2
A
665 671anti-parallel
Strand 3
A
822 828anti-parallel
Strand 4
A
737 742anti-parallel
Strand 5
A
781 785anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
686 688first strand
Strand 2
A
696 698anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
806 807first strand
Strand 2
A
715 717anti-parallel
Strand 3
A
850 851anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
416 421first strand
Strand 2
C
424 429anti-parallel
Strand 3
A
859 862anti-parallel
Strand 4
C
580 581anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 14first strand
Strand 2
B
33 36anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 20first strand
Strand 2
B
25 27anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 70first strand
Strand 2
B
210 218anti-parallel
Strand 3
B
106 112anti-parallel
Strand 4
B
166 167anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 80first strand
Strand 2
B
191 196anti-parallel
Strand 3
B
122 127anti-parallel
Strand 4
B
154 157anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 119first strand
Strand 2
B
201 202anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
389 396first strand
Strand 2
C
556 564anti-parallel
Strand 3
C
446 453anti-parallel
Strand 4
C
493 498anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
405 410first strand
Strand 2
C
537 547anti-parallel
Strand 3
C
459 467anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
507 508first strand
Strand 2
C
439 443anti-parallel
Strand 3
C
569 573anti-parallel
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