Analysis of interatomic Contacts of Structural Units in PDB entry:
6SIH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6SIH entry

There are 10 chains in PDB entry 6SIH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ALA 638
H	MET 1	ALA 638
B	MET 1	ALA 638
F	MET 1	ALA 638
C	MET 1	ALA 638
G	MET 1	ALA 638
D	MET 1	ALA 638
I	MET 1	ALA 638
E	MET 1	ALA 638
J	MET 1	ALA 638

There are120 helices in PDB entry 6SIH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	67	Right-handed alpha
Helix 2	AA2	A	69	73	Right-handed 310
Helix 3	AA3	A	154	166	Right-handed alpha
Helix 4	AA4	A	194	197	Right-handed 310
Helix 5	AA5	A	218	225	Right-handed alpha
Helix 6	AA6	A	302	326	Right-handed alpha
Helix 7	AA7	A	341	357	Right-handed alpha
Helix 8	AA8	A	380	384	Right-handed 310
Helix 9	AA9	A	397	408	Right-handed alpha
Helix 10	AB1	A	408	418	Right-handed alpha
Helix 11	AB2	A	559	573	Right-handed alpha
Helix 12	AB3	A	576	638	Right-handed alpha
Helix 13	AB4	H	17	67	Right-handed alpha
Helix 14	AB5	H	69	73	Right-handed 310
Helix 15	AB6	H	154	166	Right-handed alpha
Helix 16	AB7	H	194	197	Right-handed 310
Helix 17	AB8	H	218	225	Right-handed alpha
Helix 18	AB9	H	302	326	Right-handed alpha
Helix 19	AC1	H	341	357	Right-handed alpha
Helix 20	AC2	H	380	384	Right-handed 310
Helix 21	AC3	H	397	408	Right-handed alpha
Helix 22	AC4	H	408	418	Right-handed alpha
Helix 23	AC5	H	559	573	Right-handed alpha
Helix 24	AC6	H	576	638	Right-handed alpha
Helix 25	AC7	B	17	67	Right-handed alpha
Helix 26	AC8	B	69	73	Right-handed 310
Helix 27	AC9	B	154	166	Right-handed alpha
Helix 28	AD1	B	194	197	Right-handed 310
Helix 29	AD2	B	218	225	Right-handed alpha
Helix 30	AD3	B	302	326	Right-handed alpha
Helix 31	AD4	B	341	357	Right-handed alpha
Helix 32	AD5	B	380	384	Right-handed 310
Helix 33	AD6	B	397	408	Right-handed alpha
Helix 34	AD7	B	408	418	Right-handed alpha
Helix 35	AD8	B	559	573	Right-handed alpha
Helix 36	AD9	B	576	638	Right-handed alpha
Helix 37	AE1	F	17	67	Right-handed alpha
Helix 38	AE2	F	69	73	Right-handed 310
Helix 39	AE3	F	154	166	Right-handed alpha
Helix 40	AE4	F	194	197	Right-handed 310
Helix 41	AE5	F	218	225	Right-handed alpha
Helix 42	AE6	F	302	326	Right-handed alpha
Helix 43	AE7	F	341	357	Right-handed alpha
Helix 44	AE8	F	380	384	Right-handed 310
Helix 45	AE9	F	397	408	Right-handed alpha
Helix 46	AF1	F	408	418	Right-handed alpha
Helix 47	AF2	F	559	573	Right-handed alpha
Helix 48	AF3	F	576	638	Right-handed alpha
Helix 49	AF4	C	17	67	Right-handed alpha
Helix 50	AF5	C	69	73	Right-handed 310
Helix 51	AF6	C	154	166	Right-handed alpha
Helix 52	AF7	C	194	197	Right-handed 310
Helix 53	AF8	C	218	225	Right-handed alpha
Helix 54	AF9	C	302	326	Right-handed alpha
Helix 55	AG1	C	341	357	Right-handed alpha
Helix 56	AG2	C	380	384	Right-handed 310
Helix 57	AG3	C	397	408	Right-handed alpha
Helix 58	AG4	C	408	418	Right-handed alpha
Helix 59	AG5	C	559	573	Right-handed alpha
Helix 60	AG6	C	576	638	Right-handed alpha
Helix 61	AG7	G	17	67	Right-handed alpha
Helix 62	AG8	G	69	73	Right-handed 310
Helix 63	AG9	G	154	166	Right-handed alpha
Helix 64	AH1	G	194	197	Right-handed 310
Helix 65	AH2	G	218	225	Right-handed alpha
Helix 66	AH3	G	302	326	Right-handed alpha
Helix 67	AH4	G	341	357	Right-handed alpha
Helix 68	AH5	G	380	384	Right-handed 310
Helix 69	AH6	G	397	408	Right-handed alpha
Helix 70	AH7	G	408	418	Right-handed alpha
Helix 71	AH8	G	559	573	Right-handed alpha
Helix 72	AH9	G	576	638	Right-handed alpha
Helix 73	AI1	D	17	67	Right-handed alpha
Helix 74	AI2	D	69	73	Right-handed 310
Helix 75	AI3	D	154	166	Right-handed alpha
Helix 76	AI4	D	194	197	Right-handed 310
Helix 77	AI5	D	218	225	Right-handed alpha
Helix 78	AI6	D	302	326	Right-handed alpha
Helix 79	AI7	D	341	357	Right-handed alpha
Helix 80	AI8	D	380	384	Right-handed 310
Helix 81	AI9	D	397	408	Right-handed alpha
Helix 82	AJ1	D	408	418	Right-handed alpha
Helix 83	AJ2	D	559	573	Right-handed alpha
Helix 84	AJ3	D	576	638	Right-handed alpha
Helix 85	AJ4	I	17	67	Right-handed alpha
Helix 86	AJ5	I	69	73	Right-handed 310
Helix 87	AJ6	I	154	166	Right-handed alpha
Helix 88	AJ7	I	194	197	Right-handed 310
Helix 89	AJ8	I	218	225	Right-handed alpha
Helix 90	AJ9	I	302	326	Right-handed alpha
Helix 91	AK1	I	341	357	Right-handed alpha
Helix 92	AK2	I	380	384	Right-handed 310
Helix 93	AK3	I	397	408	Right-handed alpha
Helix 94	AK4	I	408	418	Right-handed alpha
Helix 95	AK5	I	559	573	Right-handed alpha
Helix 96	AK6	I	576	638	Right-handed alpha
Helix 97	AK7	E	17	67	Right-handed alpha
Helix 98	AK8	E	69	73	Right-handed 310
Helix 99	AK9	E	154	166	Right-handed alpha
Helix 100	AL1	E	194	197	Right-handed 310
Helix 101	AL2	E	218	225	Right-handed alpha
Helix 102	AL3	E	302	326	Right-handed alpha
Helix 103	AL4	E	341	357	Right-handed alpha
Helix 104	AL5	E	380	384	Right-handed 310
Helix 105	AL6	E	397	408	Right-handed alpha
Helix 106	AL7	E	408	418	Right-handed alpha
Helix 107	AL8	E	559	573	Right-handed alpha
Helix 108	AL9	E	576	638	Right-handed alpha
Helix 109	AM1	J	17	67	Right-handed alpha
Helix 110	AM2	J	69	73	Right-handed 310
Helix 111	AM3	J	154	166	Right-handed alpha
Helix 112	AM4	J	194	197	Right-handed 310
Helix 113	AM5	J	218	225	Right-handed alpha
Helix 114	AM6	J	302	326	Right-handed alpha
Helix 115	AM7	J	341	357	Right-handed alpha
Helix 116	AM8	J	380	384	Right-handed 310
Helix 117	AM9	J	397	408	Right-handed alpha
Helix 118	AN1	J	408	418	Right-handed alpha
Helix 119	AN2	J	559	573	Right-handed alpha
Helix 120	AN3	J	576	638	Right-handed alpha

There are 51 sheets in PDB entry 6SIH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	80	first strand
Strand 2	A	291	299	anti-parallel
Strand 3	A	99	107	anti-parallel
Strand 4	A	260	264	anti-parallel
Strand 5	A	267	271	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	88	92	first strand
Strand 2	A	283	287	anti-parallel
Strand 3	A	275	280	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	115	first strand
Strand 2	A	185	190	anti-parallel
Strand 3	A	170	175	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	149	first strand
Strand 2	A	134	140	anti-parallel
Strand 3	A	199	202	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	386	387	first strand
Strand 2	A	395	396	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	76	80	first strand
Strand 2	H	291	299	anti-parallel
Strand 3	H	99	107	anti-parallel
Strand 4	H	260	264	anti-parallel
Strand 5	H	267	271	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	88	92	first strand
Strand 2	H	283	287	anti-parallel
Strand 3	H	275	280	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	113	115	first strand
Strand 2	H	185	190	anti-parallel
Strand 3	H	170	175	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	143	149	first strand
Strand 2	H	134	140	anti-parallel
Strand 3	H	199	202	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	386	387	first strand
Strand 2	H	395	396	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	80	first strand
Strand 2	B	291	299	anti-parallel
Strand 3	B	99	107	anti-parallel
Strand 4	B	260	264	anti-parallel
Strand 5	B	267	271	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	88	92	first strand
Strand 2	B	283	287	anti-parallel
Strand 3	B	275	280	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	113	115	first strand
Strand 2	B	185	190	anti-parallel
Strand 3	B	170	175	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	149	first strand
Strand 2	B	134	140	anti-parallel
Strand 3	B	199	202	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	386	387	first strand
Strand 2	B	395	396	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	76	80	first strand
Strand 2	F	291	299	anti-parallel
Strand 3	F	99	107	anti-parallel
Strand 4	F	260	264	anti-parallel
Strand 5	F	267	271	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	88	92	first strand
Strand 2	F	283	287	anti-parallel
Strand 3	F	275	280	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	113	115	first strand
Strand 2	F	185	190	anti-parallel
Strand 3	F	170	175	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	143	149	first strand
Strand 2	F	134	140	anti-parallel
Strand 3	F	199	202	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	386	387	first strand
Strand 2	F	395	396	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	9	first strand
Strand 2	G	9	10	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	80	first strand
Strand 2	C	291	299	anti-parallel
Strand 3	C	99	107	anti-parallel
Strand 4	C	260	264	anti-parallel
Strand 5	C	267	271	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	88	92	first strand
Strand 2	C	283	287	anti-parallel
Strand 3	C	275	280	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	113	115	first strand
Strand 2	C	185	190	anti-parallel
Strand 3	C	170	175	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	149	first strand
Strand 2	C	134	140	anti-parallel
Strand 3	C	199	202	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	386	387	first strand
Strand 2	C	395	396	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	76	80	first strand
Strand 2	G	291	299	anti-parallel
Strand 3	G	99	107	anti-parallel
Strand 4	G	260	264	anti-parallel
Strand 5	G	267	271	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	88	92	first strand
Strand 2	G	283	287	anti-parallel
Strand 3	G	275	280	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	113	115	first strand
Strand 2	G	185	190	anti-parallel
Strand 3	G	170	175	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	143	149	first strand
Strand 2	G	134	140	anti-parallel
Strand 3	G	199	202	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	386	387	first strand
Strand 2	G	395	396	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	80	first strand
Strand 2	D	291	299	anti-parallel
Strand 3	D	99	107	anti-parallel
Strand 4	D	260	264	anti-parallel
Strand 5	D	267	271	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	88	92	first strand
Strand 2	D	283	287	anti-parallel
Strand 3	D	275	280	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	113	115	first strand
Strand 2	D	185	190	anti-parallel
Strand 3	D	170	175	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	143	149	first strand
Strand 2	D	134	140	anti-parallel
Strand 3	D	199	202	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	386	387	first strand
Strand 2	D	395	396	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	76	80	first strand
Strand 2	I	291	299	anti-parallel
Strand 3	I	99	107	anti-parallel
Strand 4	I	260	264	anti-parallel
Strand 5	I	267	271	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	88	92	first strand
Strand 2	I	283	287	anti-parallel
Strand 3	I	275	280	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	113	115	first strand
Strand 2	I	185	190	anti-parallel
Strand 3	I	170	175	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	143	149	first strand
Strand 2	I	134	140	anti-parallel
Strand 3	I	199	202	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	386	387	first strand
Strand 2	I	395	396	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	80	first strand
Strand 2	E	291	299	anti-parallel
Strand 3	E	99	107	anti-parallel
Strand 4	E	260	264	anti-parallel
Strand 5	E	267	271	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	88	92	first strand
Strand 2	E	283	287	anti-parallel
Strand 3	E	275	280	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	113	115	first strand
Strand 2	E	185	190	anti-parallel
Strand 3	E	170	175	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	143	149	first strand
Strand 2	E	134	140	anti-parallel
Strand 3	E	199	202	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	386	387	first strand
Strand 2	E	395	396	anti-parallel

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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	76	80	first strand
Strand 2	J	291	299	anti-parallel
Strand 3	J	99	107	anti-parallel
Strand 4	J	260	264	anti-parallel
Strand 5	J	267	271	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	88	92	first strand
Strand 2	J	283	287	anti-parallel
Strand 3	J	275	280	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	113	115	first strand
Strand 2	J	185	190	anti-parallel
Strand 3	J	170	175	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	143	149	first strand
Strand 2	J	134	140	anti-parallel
Strand 3	J	199	202	anti-parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	386	387	first strand
Strand 2	J	395	396	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6SIH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6SIH