Analysis of interatomic Contacts of Structural Units in PDB entry:
6SII


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SII entry

There is 1 chain in PDB entry 6SII (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6SII. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 25Right-handed alpha
Helix 2
AA2
A
28 44Right-handed alpha
Helix 3
AA3
A
48 61Right-handed alpha
Helix 4
AA4
A
75 106Right-handed alpha
Helix 5
AA5
A
123 148Right-handed alpha
Helix 6
AA6
A
153 177Right-handed alpha
Helix 7
AA7
A
201 213Right-handed alpha
Helix 8
AA8
A
213 218Right-handed alpha
Helix 9
AA9
A
218 229Right-handed alpha
Helix 10
AB1
A
231 235Right-handed 310
Helix 11
AB2
A
236 262Right-handed alpha
Helix 12
AB3
A
272 277Right-handed alpha
Helix 13
AB4
A
280 290Right-handed alpha
Helix 14
AB5
A
291 302Right-handed alpha
Helix 15
AB6
A
306 320Right-handed alpha
Helix 16
AB7
A
321 346Right-handed alpha
Helix 17
AB8
A
348 363Right-handed alpha
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There are no sheets in PDB entry 6SII
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il