Analysis of interatomic Contacts of Structural Units in PDB entry:
6SL1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SL1 entry

There is 1 chain in PDB entry 6SL1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 14ALA 2944
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are157 helices in PDB entry 6SL1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 22Right-handed alpha
Helix 2
AA2
A
29 40Right-handed alpha
Helix 3
AA3
A
56 72Right-handed alpha
Helix 4
AA4
A
87 91Right-handed 310
Helix 5
AA5
A
93 99Right-handed alpha
Helix 6
AA6
A
110 125Right-handed alpha
Helix 7
AA7
A
136 146Right-handed alpha
Helix 8
AA8
A
162 179Right-handed alpha
Helix 9
AA9
A
218 233Right-handed alpha
Helix 10
AB1
A
239 243Right-handed 310
Helix 11
AB2
A
245 248Right-handed 310
Helix 12
AB3
A
249 255Right-handed alpha
Helix 13
AB4
A
270 275Right-handed alpha
Helix 14
AB5
A
276 279Right-handed 310
Helix 15
AB6
A
283 299Right-handed alpha
Helix 16
AB7
A
312 316Right-handed 310
Helix 17
AB8
A
318 326Right-handed alpha
Helix 18
AB9
A
327 328Right-handed 310
Helix 19
AC1
A
329 333Right-handed 310
Helix 20
AC2
A
346 357Right-handed alpha
Helix 21
AC3
A
358 362Right-handed 310
Helix 22
AC4
A
368 370Right-handed 310
Helix 23
AC5
A
399 412Right-handed alpha
Helix 24
AC6
A
449 453Right-handed 310
Helix 25
AC7
A
457 460Right-handed 310
Helix 26
AC8
A
461 467Right-handed alpha
Helix 27
AC9
A
467 474Right-handed alpha
Helix 28
AD1
A
481 490Right-handed alpha
Helix 29
AD2
A
499 513Right-handed alpha
Helix 30
AD3
A
519 523Right-handed 310
Helix 31
AD4
A
524 535Right-handed alpha
Helix 32
AD5
A
543 557Right-handed alpha
Helix 33
AD6
A
565 575Right-handed alpha
Helix 34
AD7
A
584 598Right-handed alpha
Helix 35
AD8
A
606 621Right-handed alpha
Helix 36
AD9
A
627 632Right-handed alpha
Helix 37
AE1
A
637 646Right-handed alpha
Helix 38
AE2
A
665 676Right-handed alpha
Helix 39
AE3
A
717 737Right-handed alpha
Helix 40
AE4
A
755 769Right-handed alpha
Helix 41
AE5
A
771 776Right-handed 310
Helix 42
AE6
A
783 791Right-handed alpha
Helix 43
AE7
A
793 801Right-handed alpha
Helix 44
AE8
A
809 819Right-handed alpha
Helix 45
AE9
A
820 822Right-handed 310
Helix 46
AF1
A
826 835Right-handed alpha
Helix 47
AF2
A
837 852Right-handed alpha
Helix 48
AF3
A
853 857Right-handed 310
Helix 49
AF4
A
894 898Right-handed 310
Helix 50
AF5
A
899 919Right-handed alpha
Helix 51
AF6
A
920 924Right-handed 310
Helix 52
AF7
A
928 936Right-handed alpha
Helix 53
AF8
A
940 945Right-handed alpha
Helix 54
AF9
A
949 954Right-handed alpha
Helix 55
AG1
A
961 977Right-handed alpha
Helix 56
AG2
A
984 996Right-handed alpha
Helix 57
AG3
A
997 999Right-handed 310
Helix 58
AG4
A
1011 1023Right-handed alpha
Helix 59
AG5
A
1031 1047Right-handed alpha
Helix 60
AG6
A
1052 1057Right-handed alpha
Helix 61
AG7
A
1062 1071Right-handed alpha
Helix 62
AG8
A
1073 1084Right-handed alpha
Helix 63
AG9
A
1085 1090Right-handed 310
Helix 64
AH1
A
1092 1094Right-handed 310
Helix 65
AH2
A
1095 1107Right-handed alpha
Helix 66
AH3
A
1113 1129Right-handed alpha
Helix 67
AH4
A
1131 1133Right-handed 310
Helix 68
AH5
A
1134 1145Right-handed alpha
Helix 69
AH6
A
1159 1178Right-handed alpha
Helix 70
AH7
A
1181 1188Right-handed alpha
Helix 71
AH8
A
1189 1198Right-handed alpha
Helix 72
AH9
A
1209 1213Right-handed 310
Helix 73
AI1
A
1215 1234Right-handed alpha
Helix 74
AI2
A
1236 1248Right-handed alpha
Helix 75
AI3
A
1250 1258Right-handed alpha
Helix 76
AI4
A
1258 1271Right-handed alpha
Helix 77
AI5
A
1283 1302Right-handed alpha
Helix 78
AI6
A
1302 1313Right-handed alpha
Helix 79
AI7
A
1320 1326Right-handed alpha
Helix 80
AI8
A
1331 1344Right-handed alpha
Helix 81
AI9
A
1362 1373Right-handed alpha
Helix 82
AJ1
A
1383 1398Right-handed alpha
Helix 83
AJ2
A
1399 1402Right-handed 310
Helix 84
AJ3
A
1403 1422Right-handed alpha
Helix 85
AJ4
A
1428 1443Right-handed alpha
Helix 86
AJ5
A
1448 1462Right-handed alpha
Helix 87
AJ6
A
1469 1490Right-handed alpha
Helix 88
AJ7
A
1498 1521Right-handed alpha
Helix 89
AJ8
A
1529 1544Right-handed alpha
Helix 90
AJ9
A
1556 1570Right-handed alpha
Helix 91
AK1
A
1577 1585Right-handed alpha
Helix 92
AK2
A
1605 1612Right-handed alpha
Helix 93
AK3
A
1614 1620Right-handed alpha
Helix 94
AK4
A
1626 1645Right-handed alpha
Helix 95
AK5
A
1656 1664Right-handed alpha
Helix 96
AK6
A
1669 1680Right-handed alpha
Helix 97
AK7
A
1688 1708Right-handed alpha
Helix 98
AK8
A
1709 1720Right-handed alpha
Helix 99
AK9
A
1721 1727Right-handed alpha
Helix 100
AL1
A
1761 1772Right-handed alpha
Helix 101
AL2
A
1777 1782Right-handed alpha
Helix 102
AL3
A
1782 1790Right-handed alpha
Helix 103
AL4
A
1792 1809Right-handed alpha
Helix 104
AL5
A
1814 1828Right-handed alpha
Helix 105
AL6
A
1835 1850Right-handed alpha
Helix 106
AL7
A
1859 1863Right-handed 310
Helix 107
AL8
A
1870 1881Right-handed alpha
Helix 108
AL9
A
1883 1899Right-handed alpha
Helix 109
AM1
A
1915 1924Right-handed alpha
Helix 110
AM2
A
1928 1933Right-handed 310
Helix 111
AM3
A
1938 1949Right-handed alpha
Helix 112
AM4
A
1952 1969Right-handed alpha
Helix 113
AM5
A
1973 1989Right-handed alpha
Helix 114
AM6
A
1990 1999Right-handed alpha
Helix 115
AM7
A
2011 2022Right-handed alpha
Helix 116
AM8
A
2034 2048Right-handed alpha
Helix 117
AM9
A
2051 2072Right-handed alpha
Helix 118
AN1
A
2078 2098Right-handed alpha
Helix 119
AN2
A
2101 2120Right-handed alpha
Helix 120
AN3
A
2123 2144Right-handed alpha
Helix 121
AN4
A
2153 2175Right-handed alpha
Helix 122
AN5
A
2177 2190Right-handed alpha
Helix 123
AN6
A
2191 2198Right-handed alpha
Helix 124
AN7
A
2202 2217Right-handed alpha
Helix 125
AN8
A
2219 2233Right-handed alpha
Helix 126
AN9
A
2244 2259Right-handed alpha
Helix 127
AO1
A
2266 2271Right-handed alpha
Helix 128
AO2
A
2271 2279Right-handed alpha
Helix 129
AO3
A
2285 2304Right-handed alpha
Helix 130
AO4
A
2305 2329Right-handed alpha
Helix 131
AO5
A
2348 2386Right-handed alpha
Helix 132
AO6
A
2393 2405Right-handed alpha
Helix 133
AO7
A
2408 2419Right-handed alpha
Helix 134
AO8
A
2420 2422Right-handed 310
Helix 135
AO9
A
2423 2429Right-handed 310
Helix 136
AP1
A
2430 2435Right-handed alpha
Helix 137
AP2
A
2443 2460Right-handed alpha
Helix 138
AP3
A
2460 2474Right-handed alpha
Helix 139
AP4
A
2482 2498Right-handed alpha
Helix 140
AP5
A
2506 2523Right-handed alpha
Helix 141
AP6
A
2540 2553Right-handed alpha
Helix 142
AP7
A
2615 2633Right-handed alpha
Helix 143
AP8
A
2636 2642Right-handed alpha
Helix 144
AP9
A
2670 2682Right-handed alpha
Helix 145
AQ1
A
2687 2698Right-handed alpha
Helix 146
AQ2
A
2702 2715Right-handed alpha
Helix 147
AQ3
A
2720 2722Right-handed 310
Helix 148
AQ4
A
2723 2728Right-handed alpha
Helix 149
AQ5
A
2731 2756Right-handed alpha
Helix 150
AQ6
A
2785 2789Right-handed 310
Helix 151
AQ7
A
2801 2807Right-handed alpha
Helix 152
AQ8
A
2815 2829Right-handed alpha
Helix 153
AQ9
A
2831 2844Right-handed alpha
Helix 154
AR1
A
2853 2861Right-handed alpha
Helix 155
AR2
A
2898 2910Right-handed alpha
Helix 156
AR3
A
2915 2928Right-handed alpha
Helix 157
AR4
A
2929 2934Right-handed alpha
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There are 5 sheets in PDB entry 6SL1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 373first strand
Strand 2
A
390 391anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1550 1551first strand
Strand 2
A
1592 1593parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2534 2536first strand
Strand 2
A
2582 2585anti-parallel
Strand 3
A
2593 2599anti-parallel
Strand 4
A
2576 2579anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2534 2536first strand
Strand 2
A
2582 2585anti-parallel
Strand 3
A
2593 2599anti-parallel
Strand 4
A
2604 2611anti-parallel
Strand 5
A
2658 2662anti-parallel
Strand 6
A
2653 2655anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2667 2669first strand
Strand 2
A
2766 2769anti-parallel
Strand 3
A
2775 2777anti-parallel
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