Analysis of interatomic Contacts of Structural Units in PDB entry:
6SL2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SL2 entry

There are 14 chains in PDB entry 6SL2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0VAL 101
A
 LEU 103LEU 265
A
 GLU 267ASP 302
A
 ARG 304SER 322
A
 LEU 324LEU 410
A
 ALA 412LEU 417
A
 GLN 419GLU 464
A
 LYS 466ASP 505
A
 LEU 507THR 539
A
 GLY 541MET 554
A
 GLU 556GLU 556
A
 ASN 558VAL 599
A
 ALA 601GLN 605
A
 GLY 607THR 618
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6SL2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 27Right-handed alpha
Helix 2
AA2
A
28 30Right-handed 310
Helix 3
AA3
A
35 40Right-handed alpha
Helix 4
AA4
A
43 55Right-handed alpha
Helix 5
AA5
A
66 84Right-handed alpha
Helix 6
AA6
A
92 98Right-handed alpha
Helix 7
AA7
A
100 117Right-handed alpha
Helix 8
AA8
A
118 121Right-handed 310
Helix 9
AA9
A
126 138Right-handed alpha
Helix 10
AB1
A
150 155Right-handed alpha
Helix 11
AB2
A
156 167Right-handed alpha
Helix 12
AB3
A
179 194Right-handed alpha
Helix 13
AB4
A
202 208Right-handed alpha
Helix 14
AB5
A
213 279Right-handed alpha
Helix 15
AB6
A
284 301Right-handed alpha
Helix 16
AB7
A
301 327Right-handed alpha
Helix 17
AB8
A
339 396Right-handed alpha
Helix 18
AB9
A
402 419Right-handed alpha
Helix 19
AC1
A
419 437Right-handed alpha
Helix 20
AC2
A
448 475Right-handed alpha
Helix 21
AC3
A
482 497Right-handed alpha
Helix 22
AC4
A
505 517Right-handed alpha
Helix 23
AC5
A
528 540Right-handed alpha
Helix 24
AC6
A
546 560Right-handed alpha
Helix 25
AC7
A
563 576Right-handed alpha
Helix 26
AC8
A
582 589Right-handed alpha
Helix 27
AC9
A
592 603Right-handed alpha
Helix 28
AD1
A
613 615Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6SL2.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
580 581first strand
Strand 2
A
609 611anti-parallel
Strand 3
A
605 606anti-parallel
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