Analysis of interatomic Contacts of Structural Units in PDB entry:
6SLD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SLD entry

There is 1 chain in PDB entry 6SLD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4SER 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6SLD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 9Right-handed 310
Helix 2
AA2
A
26 43Right-handed alpha
Helix 3
AA3
A
50 61Right-handed alpha
Helix 4
AA4
A
64 82Right-handed alpha
Helix 5
AA5
A
83 85Right-handed 310
Helix 6
AA6
A
86 94Right-handed alpha
Helix 7
AA7
A
94 107Right-handed alpha
Helix 8
AA8
A
132 140Right-handed alpha
Helix 9
AA9
A
141 159Right-handed alpha
Helix 10
AB1
A
159 169Right-handed alpha
Helix 11
AB2
A
185 192Right-handed alpha
Helix 12
AB3
A
192 207Right-handed alpha
Helix 13
AB4
A
222 227Right-handed alpha
Helix 14
AB5
A
228 234Right-handed 310
Helix 15
AB6
A
235 240Right-handed alpha
Helix 16
AB7
A
248 257Right-handed alpha
Helix 17
AB8
A
258 262Right-handed 310
Helix 18
AB9
A
263 267Right-handed 310
Helix 19
AC1
A
278 282Right-handed 310
Helix 20
AC2
A
285 289Right-handed 310
Helix 21
AC3
A
303 307Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6SLD.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 116first strand
Strand 2
A
122 127anti-parallel
Strand 3
A
175 180parallel
Strand 4
A
211 217parallel
Strand 5
A
242 244parallel
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