Analysis of interatomic Contacts of Structural Units in PDB entry:
6SLM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SLM entry

There is 1 chain in PDB entry 6SLM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 631GLU 1179
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6SLM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
646 662Right-handed alpha
Helix 2
AA2
A
672 682Right-handed alpha
Helix 3
AA3
A
696 703Right-handed alpha
Helix 4
AA4
A
720 726Right-handed alpha
Helix 5
AA5
A
761 771Right-handed alpha
Helix 6
AA6
A
783 792Right-handed alpha
Helix 7
AA7
A
815 831Right-handed alpha
Helix 8
AA8
A
839 849Right-handed alpha
Helix 9
AA9
A
858 860Right-handed 310
Helix 10
AB1
A
861 868Right-handed alpha
Helix 11
AB2
A
904 913Right-handed alpha
Helix 12
AB3
A
916 927Right-handed alpha
Helix 13
AB4
A
934 941Right-handed alpha
Helix 14
AB5
A
944 957Right-handed alpha
Helix 15
AB6
A
965 982Right-handed alpha
Helix 16
AB7
A
986 998Right-handed alpha
Helix 17
AB8
A
1011 1020Right-handed alpha
Helix 18
AB9
A
1022 1026Right-handed 310
Helix 19
AC1
A
1038 1048Right-handed alpha
Helix 20
AC2
A
1063 1078Right-handed alpha
Helix 21
AC3
A
1084 1093Right-handed alpha
Helix 22
AC4
A
1095 1099Right-handed 310
Helix 23
AC5
A
1111 1122Right-handed alpha
Helix 24
AC6
A
1166 1177Right-handed alpha
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There are 7 sheets in PDB entry 6SLM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
665 668first strand
Strand 2
A
637 640parallel
Strand 3
A
689 693parallel
Strand 4
A
888 896anti-parallel
Strand 5
A
736 741anti-parallel
Strand 6
A
931 932anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
665 668first strand
Strand 2
A
637 640parallel
Strand 3
A
689 693parallel
Strand 4
A
888 896anti-parallel
Strand 5
A
958 959parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
728 729first strand
Strand 2
A
732 733anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
775 777first strand
Strand 2
A
852 857parallel
Strand 3
A
744 748anti-parallel
Strand 4
A
872 875anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
797 802first strand
Strand 2
A
805 812anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1053 1055first strand
Strand 2
A
1058 1060anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1079 1083first strand
Strand 2
A
1125 1128anti-parallel
Strand 3
A
1131 1134anti-parallel
Strand 4
A
1102 1103parallel
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