Analysis of interatomic Contacts of Structural Units in PDB entry:
6SLY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SLY entry

There is 1 chain in PDB entry 6SLY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 179ASP 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6SLY. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
184 190Right-handed alpha
Helix 2
AA2
A
194 209Right-handed alpha
Helix 3
AA3
A
212 217Right-handed alpha
Helix 4
AA4
A
247 262Right-handed alpha
Helix 5
AA5
A
263 265Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6SLY.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
235 244first strand
Strand 2
A
222 231anti-parallel
Strand 3
A
272 280anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il