Analysis of interatomic Contacts of Structural Units in PDB entry:
6SMH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6SMH entry

There are 16 chains in PDB entry 6SMH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 19	GLU 465
B	LEU 19	GLU 465
C	LEU 19	GLU 465
D	LEU 19	GLU 465
E	LEU 19	GLU 465
F	LEU 19	GLU 465
G	LEU 19	GLU 465
H	LEU 19	GLU 465
I	GLU 13	LEU 191
J	GLU 13	LYS 200
K	GLU 13	LEU 191
L	GLU 13	LEU 191
M	GLU 13	ASP 192
N	GLU 13	LEU 193
O	GLU 13	LEU 193
P	GLU 13	SER 194

There are204 helices in PDB entry 6SMH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	46	59	Right-handed alpha
Helix 2	AA2	A	110	118	Right-handed alpha
Helix 3	AA3	A	138	143	Right-handed alpha
Helix 4	AA4	A	151	160	Right-handed alpha
Helix 5	AA5	A	178	192	Right-handed alpha
Helix 6	AA6	A	210	230	Right-handed alpha
Helix 7	AA7	A	243	257	Right-handed alpha
Helix 8	AA8	A	270	285	Right-handed alpha
Helix 9	AA9	A	307	318	Right-handed alpha
Helix 10	AB1	A	332	345	Right-handed alpha
Helix 11	AB2	A	380	382	Right-handed 310
Helix 12	AB3	A	383	391	Right-handed alpha
Helix 13	AB4	A	409	430	Right-handed alpha
Helix 14	AB5	A	433	446	Right-handed alpha
Helix 15	AB6	A	449	459	Right-handed alpha
Helix 16	AB7	B	46	59	Right-handed alpha
Helix 17	AB8	B	110	118	Right-handed alpha
Helix 18	AB9	B	151	160	Right-handed alpha
Helix 19	AC1	B	178	192	Right-handed alpha
Helix 20	AC2	B	210	230	Right-handed alpha
Helix 21	AC3	B	243	257	Right-handed alpha
Helix 22	AC4	B	270	285	Right-handed alpha
Helix 23	AC5	B	307	318	Right-handed alpha
Helix 24	AC6	B	332	348	Right-handed alpha
Helix 25	AC7	B	383	391	Right-handed alpha
Helix 26	AC8	B	409	430	Right-handed alpha
Helix 27	AC9	B	433	446	Right-handed alpha
Helix 28	AD1	B	449	459	Right-handed alpha
Helix 29	AD2	C	46	59	Right-handed alpha
Helix 30	AD3	C	110	118	Right-handed alpha
Helix 31	AD4	C	151	160	Right-handed alpha
Helix 32	AD5	C	178	193	Right-handed alpha
Helix 33	AD6	C	210	225	Right-handed alpha
Helix 34	AD7	C	243	257	Right-handed alpha
Helix 35	AD8	C	270	285	Right-handed alpha
Helix 36	AD9	C	307	318	Right-handed alpha
Helix 37	AE1	C	332	344	Right-handed alpha
Helix 38	AE2	C	345	347	Right-handed 310
Helix 39	AE3	C	383	392	Right-handed alpha
Helix 40	AE4	C	409	431	Right-handed alpha
Helix 41	AE5	C	438	446	Right-handed alpha
Helix 42	AE6	C	449	459	Right-handed alpha
Helix 43	AE7	D	46	59	Right-handed alpha
Helix 44	AE8	D	110	118	Right-handed alpha
Helix 45	AE9	D	151	160	Right-handed alpha
Helix 46	AF1	D	180	192	Right-handed alpha
Helix 47	AF2	D	211	230	Right-handed alpha
Helix 48	AF3	D	243	258	Right-handed alpha
Helix 49	AF4	D	270	285	Right-handed alpha
Helix 50	AF5	D	307	318	Right-handed alpha
Helix 51	AF6	D	332	344	Right-handed alpha
Helix 52	AF7	D	383	392	Right-handed alpha
Helix 53	AF8	D	409	431	Right-handed alpha
Helix 54	AF9	D	433	446	Right-handed alpha
Helix 55	AG1	D	449	459	Right-handed alpha
Helix 56	AG2	E	46	59	Right-handed alpha
Helix 57	AG3	E	60	64	Right-handed 310
Helix 58	AG4	E	110	118	Right-handed alpha
Helix 59	AG5	E	151	160	Right-handed alpha
Helix 60	AG6	E	178	193	Right-handed alpha
Helix 61	AG7	E	210	230	Right-handed alpha
Helix 62	AG8	E	243	257	Right-handed alpha
Helix 63	AG9	E	270	282	Right-handed alpha
Helix 64	AH1	E	307	319	Right-handed alpha
Helix 65	AH2	E	332	345	Right-handed alpha
Helix 66	AH3	E	380	382	Right-handed 310
Helix 67	AH4	E	383	391	Right-handed alpha
Helix 68	AH5	E	409	431	Right-handed alpha
Helix 69	AH6	E	433	446	Right-handed alpha
Helix 70	AH7	E	449	459	Right-handed alpha
Helix 71	AH8	F	46	59	Right-handed alpha
Helix 72	AH9	F	110	118	Right-handed alpha
Helix 73	AI1	F	151	160	Right-handed alpha
Helix 74	AI2	F	178	193	Right-handed alpha
Helix 75	AI3	F	211	230	Right-handed alpha
Helix 76	AI4	F	243	258	Right-handed alpha
Helix 77	AI5	F	270	285	Right-handed alpha
Helix 78	AI6	F	307	318	Right-handed alpha
Helix 79	AI7	F	332	344	Right-handed alpha
Helix 80	AI8	F	380	382	Right-handed 310
Helix 81	AI9	F	383	391	Right-handed alpha
Helix 82	AJ1	F	409	430	Right-handed alpha
Helix 83	AJ2	F	438	446	Right-handed alpha
Helix 84	AJ3	F	449	459	Right-handed alpha
Helix 85	AJ4	G	46	59	Right-handed alpha
Helix 86	AJ5	G	110	118	Right-handed alpha
Helix 87	AJ6	G	138	143	Right-handed alpha
Helix 88	AJ7	G	151	160	Right-handed alpha
Helix 89	AJ8	G	178	192	Right-handed alpha
Helix 90	AJ9	G	210	230	Right-handed alpha
Helix 91	AK1	G	243	257	Right-handed alpha
Helix 92	AK2	G	270	285	Right-handed alpha
Helix 93	AK3	G	307	318	Right-handed alpha
Helix 94	AK4	G	332	344	Right-handed alpha
Helix 95	AK5	G	380	382	Right-handed 310
Helix 96	AK6	G	383	391	Right-handed alpha
Helix 97	AK7	G	409	430	Right-handed alpha
Helix 98	AK8	G	437	446	Right-handed alpha
Helix 99	AK9	G	449	457	Right-handed alpha
Helix 100	AL1	H	46	59	Right-handed alpha
Helix 101	AL2	H	110	118	Right-handed alpha
Helix 102	AL3	H	138	143	Right-handed alpha
Helix 103	AL4	H	151	160	Right-handed alpha
Helix 104	AL5	H	178	192	Right-handed alpha
Helix 105	AL6	H	210	230	Right-handed alpha
Helix 106	AL7	H	243	257	Right-handed alpha
Helix 107	AL8	H	270	285	Right-handed alpha
Helix 108	AL9	H	295	300	Right-handed alpha
Helix 109	AM1	H	307	318	Right-handed alpha
Helix 110	AM2	H	332	348	Right-handed alpha
Helix 111	AM3	H	380	382	Right-handed 310
Helix 112	AM4	H	383	392	Right-handed alpha
Helix 113	AM5	H	409	430	Right-handed alpha
Helix 114	AM6	H	437	446	Right-handed alpha
Helix 115	AM7	H	449	459	Right-handed alpha
Helix 116	AM8	I	15	24	Right-handed alpha
Helix 117	AM9	I	27	34	Right-handed alpha
Helix 118	AN1	I	44	48	Right-handed 310
Helix 119	AN2	I	55	60	Right-handed alpha
Helix 120	AN3	I	63	66	Right-handed 310
Helix 121	AN4	I	67	75	Right-handed alpha
Helix 122	AN5	I	103	109	Right-handed alpha
Helix 123	AN6	I	121	130	Right-handed alpha
Helix 124	AN7	I	144	157	Right-handed alpha
Helix 125	AN8	I	162	168	Right-handed alpha
Helix 126	AN9	I	179	185	Right-handed alpha
Helix 127	AO1	J	18	24	Right-handed alpha
Helix 128	AO2	J	44	52	Right-handed alpha
Helix 129	AO3	J	60	72	Right-handed alpha
Helix 130	AO4	J	89	96	Right-handed alpha
Helix 131	AO5	J	103	108	Right-handed alpha
Helix 132	AO6	J	109	114	Right-handed alpha
Helix 133	AO7	J	121	132	Right-handed alpha
Helix 134	AO8	J	144	149	Right-handed alpha
Helix 135	AO9	J	150	153	Right-handed 310
Helix 136	AP1	J	179	187	Right-handed alpha
Helix 137	AP2	J	190	195	Right-handed alpha
Helix 138	AP3	K	17	24	Right-handed alpha
Helix 139	AP4	K	28	38	Right-handed alpha
Helix 140	AP5	K	39	41	Right-handed 310
Helix 141	AP6	K	44	52	Right-handed alpha
Helix 142	AP7	K	60	72	Right-handed alpha
Helix 143	AP8	K	89	96	Right-handed alpha
Helix 144	AP9	K	101	109	Right-handed alpha
Helix 145	AQ1	K	110	112	Right-handed 310
Helix 146	AQ2	K	121	132	Right-handed alpha
Helix 147	AQ3	K	144	156	Right-handed alpha
Helix 148	AQ4	K	179	186	Right-handed alpha
Helix 149	AQ5	L	18	23	Right-handed alpha
Helix 150	AQ6	L	28	39	Right-handed alpha
Helix 151	AQ7	L	44	49	Right-handed alpha
Helix 152	AQ8	L	55	62	Right-handed alpha
Helix 153	AQ9	L	64	72	Right-handed alpha
Helix 154	AR1	L	89	96	Right-handed alpha
Helix 155	AR2	L	100	115	Right-handed alpha
Helix 156	AR3	L	123	132	Right-handed alpha
Helix 157	AR4	L	144	153	Right-handed alpha
Helix 158	AR5	L	162	166	Right-handed 310
Helix 159	AR6	L	179	186	Right-handed alpha
Helix 160	AR7	M	18	23	Right-handed alpha
Helix 161	AR8	M	28	39	Right-handed alpha
Helix 162	AR9	M	44	49	Right-handed alpha
Helix 163	AS1	M	55	72	Right-handed alpha
Helix 164	AS2	M	89	96	Right-handed alpha
Helix 165	AS3	M	101	115	Right-handed alpha
Helix 166	AS4	M	123	134	Right-handed alpha
Helix 167	AS5	M	144	151	Right-handed alpha
Helix 168	AS6	M	163	168	Right-handed alpha
Helix 169	AS7	M	179	185	Right-handed alpha
Helix 170	AS8	M	186	190	Right-handed 310
Helix 171	AS9	N	17	24	Right-handed alpha
Helix 172	AT1	N	28	39	Right-handed alpha
Helix 173	AT2	N	44	52	Right-handed alpha
Helix 174	AT3	N	60	72	Right-handed alpha
Helix 175	AT4	N	89	96	Right-handed alpha
Helix 176	AT5	N	105	114	Right-handed alpha
Helix 177	AT6	N	121	132	Right-handed alpha
Helix 178	AT7	N	144	156	Right-handed alpha
Helix 179	AT8	N	162	167	Right-handed alpha
Helix 180	AT9	N	179	186	Right-handed alpha
Helix 181	AU1	N	187	190	Right-handed 310
Helix 182	AU2	O	18	23	Right-handed alpha
Helix 183	AU3	O	28	39	Right-handed alpha
Helix 184	AU4	O	44	49	Right-handed alpha
Helix 185	AU5	O	60	72	Right-handed alpha
Helix 186	AU6	O	82	86	Right-handed 310
Helix 187	AU7	O	89	96	Right-handed alpha
Helix 188	AU8	O	104	115	Right-handed alpha
Helix 189	AU9	O	121	128	Right-handed alpha
Helix 190	AV1	O	129	132	Right-handed 310
Helix 191	AV2	O	144	151	Right-handed alpha
Helix 192	AV3	O	179	185	Right-handed alpha
Helix 193	AV4	O	189	193	Right-handed 310
Helix 194	AV5	P	18	24	Right-handed alpha
Helix 195	AV6	P	28	39	Right-handed alpha
Helix 196	AV7	P	44	52	Right-handed alpha
Helix 197	AV8	P	60	72	Right-handed alpha
Helix 198	AV9	P	89	96	Right-handed alpha
Helix 199	AW1	P	101	115	Right-handed alpha
Helix 200	AW2	P	121	132	Right-handed alpha
Helix 201	AW3	P	144	151	Right-handed alpha
Helix 202	AW4	P	162	167	Right-handed alpha
Helix 203	AW5	P	179	185	Right-handed alpha
Helix 204	AW6	P	189	194	Right-handed 310

There are 28 sheets in PDB entry 6SMH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	86	first strand
Strand 2	A	94	97	anti-parallel
Strand 3	A	36	41	anti-parallel
Strand 4	A	127	134	anti-parallel
Strand 5	A	305	306	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	287	289	first strand
Strand 2	A	261	263	parallel
Strand 3	A	234	238	parallel
Strand 4	A	196	198	parallel
Strand 5	A	166	170	parallel
Strand 6	A	396	397	parallel
Strand 7	A	372	375	parallel
Strand 8	A	322	324	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	350	351	first strand
Strand 2	A	363	364	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	80	81	first strand
Strand 2	B	94	99	anti-parallel
Strand 3	B	85	86	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	80	81	first strand
Strand 2	B	94	99	anti-parallel
Strand 3	B	36	40	anti-parallel
Strand 4	B	129	134	anti-parallel
Strand 5	B	305	306	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	287	289	first strand
Strand 2	B	261	263	parallel
Strand 3	B	234	238	parallel
Strand 4	B	196	198	parallel
Strand 5	B	166	170	parallel
Strand 6	B	396	397	parallel
Strand 7	B	372	375	parallel
Strand 8	B	322	324	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	350	351	first strand
Strand 2	B	363	364	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	86	first strand
Strand 2	C	94	97	anti-parallel
Strand 3	C	35	41	anti-parallel
Strand 4	C	127	135	anti-parallel
Strand 5	C	305	306	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	196	198	first strand
Strand 2	C	166	170	parallel
Strand 3	C	396	397	parallel
Strand 4	C	372	375	parallel
Strand 5	C	322	324	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	237	238	first strand
Strand 2	C	261	263	parallel
Strand 3	C	287	289	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	86	first strand
Strand 2	D	94	98	anti-parallel
Strand 3	D	35	41	anti-parallel
Strand 4	D	127	134	anti-parallel
Strand 5	D	305	306	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	166	169	first strand
Strand 2	D	396	399	parallel
Strand 3	D	372	375	parallel
Strand 4	D	322	324	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	196	198	first strand
Strand 2	D	234	238	parallel
Strand 3	D	261	263	parallel
Strand 4	D	287	289	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	350	351	first strand
Strand 2	D	363	364	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	85	86	first strand
Strand 2	E	94	97	anti-parallel
Strand 3	E	35	41	anti-parallel
Strand 4	E	127	135	anti-parallel
Strand 5	E	305	306	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	166	167	first strand
Strand 2	E	396	397	parallel
Strand 3	E	372	375	parallel
Strand 4	E	322	324	parallel
Strand 5	E	289	290	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	350	351	first strand
Strand 2	E	363	364	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	85	86	first strand
Strand 2	F	94	95	anti-parallel
Strand 3	F	36	41	anti-parallel
Strand 4	F	127	134	anti-parallel
Strand 5	F	305	306	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	166	167	first strand
Strand 2	F	396	397	parallel
Strand 3	F	372	375	parallel
Strand 4	F	322	324	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	237	238	first strand
Strand 2	F	262	263	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	350	351	first strand
Strand 2	F	363	364	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	36	39	first strand
Strand 2	G	94	97	anti-parallel
Strand 3	G	85	86	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	131	132	first strand
Strand 2	G	305	306	parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	234	235	first strand
Strand 2	G	196	198	parallel
Strand 3	G	166	170	parallel
Strand 4	G	396	397	parallel
Strand 5	G	372	375	parallel
Strand 6	G	322	324	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	261	263	first strand
Strand 2	G	287	289	parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	85	86	first strand
Strand 2	H	94	97	anti-parallel
Strand 3	H	36	41	anti-parallel
Strand 4	H	127	134	anti-parallel
Strand 5	H	305	306	parallel

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There are 8 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	287	289	first strand
Strand 2	H	261	263	parallel
Strand 3	H	234	238	parallel
Strand 4	H	196	198	parallel
Strand 5	H	166	170	parallel
Strand 6	H	396	397	parallel
Strand 7	H	372	375	parallel
Strand 8	H	322	324	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	350	351	first strand
Strand 2	H	363	364	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6SMH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6SMH