Analysis of interatomic Contacts of Structural Units in PDB entry:
6SNJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SNJ entry

There are 2 chains in PDB entry 6SNJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 260GLY 390
B
 G 91 C 118
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6SNJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
266 270Right-handed 310
Helix 2
AA2
A
272 276Right-handed 310
Helix 3
AA3
A
297 306Right-handed alpha
Helix 4
AA4
A
343 355Right-handed alpha
Helix 5
AA5
A
371 375Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6SNJ.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 326first strand
Strand 2
A
333 340anti-parallel
Strand 3
A
286 290anti-parallel
Strand 4
A
365 368anti-parallel
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