Analysis of interatomic Contacts of Structural Units in PDB entry:
6SNR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SNR entry

There is 1 chain in PDB entry 6SNR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 402
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6SNR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 18Right-handed alpha
Helix 2
AA2
A
22 25Right-handed 310
Helix 3
AA3
A
26 34Right-handed alpha
Helix 4
AA4
A
35 37Right-handed 310
Helix 5
AA5
A
82 100Right-handed alpha
Helix 6
AA6
A
112 115Right-handed 310
Helix 7
AA7
A
116 126Right-handed alpha
Helix 8
AA8
A
155 163Right-handed alpha
Helix 9
AA9
A
164 178Right-handed alpha
Helix 10
AB1
A
185 187Right-handed 310
Helix 11
AB2
A
188 203Right-handed alpha
Helix 12
AB3
A
209 221Right-handed alpha
Helix 13
AB4
A
222 224Right-handed 310
Helix 14
AB5
A
234 263Right-handed alpha
Helix 15
AB6
A
266 298Right-handed alpha
Helix 16
AB7
A
327 330Right-handed 310
Helix 17
AB8
A
331 348Right-handed alpha
Helix 18
AB9
A
367 375Right-handed alpha
Helix 19
AC1
A
393 401Right-handed alpha
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There are 2 sheets in PDB entry 6SNR. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
39 47anti-parallel
Strand 3
A
50 61anti-parallel
Strand 4
A
68 72anti-parallel
Strand 5
A
102 107parallel
Strand 6
A
388 391anti-parallel
Strand 7
A
129 130anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 183first strand
Strand 2
A
226 233anti-parallel
Strand 3
A
302 312anti-parallel
Strand 4
A
315 323anti-parallel
Strand 5
A
351 356parallel
Strand 6
A
146 151anti-parallel
Strand 7
A
380 383anti-parallel
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