Analysis of interatomic Contacts of Structural Units in PDB entry:
6SOZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SOZ entry

There are 3 chains in PDB entry 6SOZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 20ARG 342
B
 TYR 18PHE 337
C
 ASP 3CYS 674
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 6SOZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 75Right-handed alpha
Helix 2
AA2
A
86 136Right-handed alpha
Helix 3
AA3
A
167 171Right-handed 310
Helix 4
AA4
A
176 183Right-handed alpha
Helix 5
AA5
A
188 195Right-handed alpha
Helix 6
AA6
A
197 202Right-handed alpha
Helix 7
AA7
A
202 206Right-handed alpha
Helix 8
AA8
A
215 219Right-handed 310
Helix 9
AA9
A
259 263Right-handed 310
Helix 10
AB1
A
274 277Right-handed 310
Helix 11
AB2
A
278 310Right-handed alpha
Helix 12
AB3
A
311 313Right-handed 310
Helix 13
AB4
A
314 320Right-handed alpha
Helix 14
AB5
A
322 341Right-handed alpha
Helix 15
AB6
B
27 42Right-handed alpha
Helix 16
AB7
B
42 75Right-handed alpha
Helix 17
AB8
B
86 136Right-handed alpha
Helix 18
AB9
B
176 183Right-handed alpha
Helix 19
AC1
B
188 196Right-handed alpha
Helix 20
AC2
B
197 202Right-handed alpha
Helix 21
AC3
B
202 206Right-handed alpha
Helix 22
AC4
B
215 219Right-handed 310
Helix 23
AC5
B
258 262Right-handed 310
Helix 24
AC6
B
273 276Right-handed 310
Helix 25
AC7
B
277 310Right-handed alpha
Helix 26
AC8
B
313 318Right-handed alpha
Helix 27
AC9
B
320 337Right-handed alpha
Helix 28
AD1
C
12 28Right-handed alpha
Helix 29
AD2
C
44 54Right-handed alpha
Helix 30
AD3
C
63 72Right-handed alpha
Helix 31
AD4
C
108 112Right-handed 310
Helix 32
AD5
C
128 135Right-handed alpha
Helix 33
AD6
C
136 139Right-handed 310
Helix 34
AD7
C
145 154Right-handed alpha
Helix 35
AD8
C
167 172Right-handed 310
Helix 36
AD9
C
186 197Right-handed alpha
Helix 37
AE1
C
208 214Right-handed alpha
Helix 38
AE2
C
216 221Right-handed alpha
Helix 39
AE3
C
236 238Right-handed 310
Helix 40
AE4
C
259 274Right-handed alpha
Helix 41
AE5
C
310 316Right-handed alpha
Helix 42
AE6
C
316 329Right-handed alpha
Helix 43
AE7
C
348 362Right-handed alpha
Helix 44
AE8
C
373 384Right-handed alpha
Helix 45
AE9
C
392 402Right-handed alpha
Helix 46
AF1
C
417 421Right-handed 310
Helix 47
AF2
C
460 472Right-handed alpha
Helix 48
AF3
C
475 480Right-handed alpha
Helix 49
AF4
C
492 496Right-handed 310
Helix 50
AF5
C
501 505Right-handed 310
Helix 51
AF6
C
516 527Right-handed alpha
Helix 52
AF7
C
536 542Right-handed alpha
Helix 53
AF8
C
548 553Right-handed alpha
Helix 54
AF9
C
555 557Right-handed 310
Helix 55
AG1
C
572 577Right-handed 310
Helix 56
AG2
C
593 608Right-handed alpha
Helix 57
AG3
C
646 661Right-handed alpha
Helix 58
AG4
C
662 666Right-handed 310
Helix 59
AG5
C
668 678Right-handed alpha
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There are 13 sheets in PDB entry 6SOZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 146first strand
Strand 2
A
24 26parallel
Strand 3
A
207 208anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
142 143anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 238first strand
Strand 2
A
243 244anti-parallel
Strand 3
A
269 271anti-parallel
Strand 4
A
255 257parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 146first strand
Strand 2
B
24 26parallel
Strand 3
B
207 208anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
235 237first strand
Strand 2
B
242 244anti-parallel
Strand 3
B
268 270anti-parallel
Strand 4
B
254 256parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 10first strand
Strand 2
C
36 41parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 62first strand
Strand 2
C
250 254anti-parallel
Strand 3
C
77 84anti-parallel
Strand 4
C
301 304anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
157 158first strand
Strand 2
C
117 119parallel
Strand 3
C
202 206parallel
Strand 4
C
94 102anti-parallel
Strand 5
C
223 226anti-parallel
Strand 6
C
232 234anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
157 158first strand
Strand 2
C
117 119parallel
Strand 3
C
202 206parallel
Strand 4
C
94 102anti-parallel
Strand 5
C
244 247anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
342 347first strand
Strand 2
C
366 371parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
388 391first strand
Strand 2
C
586 589anti-parallel
Strand 3
C
405 411anti-parallel
Strand 4
C
637 640anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
483 484first strand
Strand 2
C
449 451parallel
Strand 3
C
530 534parallel
Strand 4
C
426 433anti-parallel
Strand 5
C
559 562anti-parallel
Strand 6
C
568 570anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
483 484first strand
Strand 2
C
449 451parallel
Strand 3
C
530 534parallel
Strand 4
C
426 433anti-parallel
Strand 5
C
580 582anti-parallel
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