Analysis of interatomic Contacts of Structural Units in PDB entry:
6SP0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6SP0 entry

There is 1 chain in PDB entry 6SP0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 382PHE 590
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6SP0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
397 416Right-handed alpha
Helix 2
AA2
A
442 461Right-handed alpha
Helix 3
AA3
A
533 536Right-handed 310
Helix 4
AA4
A
539 552Right-handed alpha
Helix 5
AA5
A
569 581Right-handed alpha
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There are 2 sheets in PDB entry 6SP0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
384 385first strand
Strand 2
A
392 393anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 429first strand
Strand 2
A
432 437anti-parallel
Strand 3
A
474 480anti-parallel
Strand 4
A
483 492anti-parallel
Strand 5
A
524 531anti-parallel
Strand 6
A
563 566parallel
Strand 7
A
586 588parallel
Strand 8
A
495 499anti-parallel
Strand 9
A
515 521anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il